Canonical Allele Identifier: CA346745859

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• dbSNP Id: rs1680002012
• gnomAD v3: 2-48688185-C-A
• gnomAD v4: 2-48688185-C-A
• MyVariant Identifiers: chr2:g.48915324C>A (hg19) ; chr2:g.48688185C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688185C>A , CM000664.2:g.48688185C>A	GRCh38
NC_000002.11:g.48915324C>A , CM000664.1:g.48915324C>A	GRCh37
NC_000002.10:g.48768828C>A	NCBI36
NG_008193.1:g.72557G>T
NG_033050.1:g.163261C>A
NG_008193.2:g.72557G>T
NG_033050.2:g.163261C>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1612G>T (LHCGR) MANE Select	ENSP00000294954.6:p.Ala538Ser
ENST00000294954.11:c.1612G>T (LHCGR)	ENSP00000294954.6:p.Ala538Ser
ENST00000401907.5:c.948-46G>T (LHCGR)	ENSP00000385406.1:n.948-46G>T
ENST00000402114.6:c.3441+16505C>A (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16505C>A
ENST00000403273.5:c.*356G>T (LHCGR)	ENSP00000385847.1:n.*356G>T
ENST00000405626.5:c.1531G>T (LHCGR)	ENSP00000386033.1:p.Ala511Ser
ENST00000508440.1:c.276+16505C>A (GTF2A1L)	ENSP00000421474.1:n.276+16505C>A
ENST00000602369.3:c.*220+6039G>T	ENSP00000473498.1:n.*220+6039G>T
NM_000233.3:c.1612G>T (LHCGR)	NP_000224.2:p.Ala538Ser
NM_001198593.1:c.3441+16505C>A (STON1-GTF2A1L)	NP_001185522.1:n.3441+16505C>A
XM_005264309.2:c.655G>T (LHCGR)	XP_005264366.1:p.Ala219Ser
XM_006712015.2:c.682G>T (LHCGR)	XP_006712078.1:p.Ala228Ser
XM_011532828.1:c.1537G>T (LHCGR)	XP_011531130.1:p.Ala513Ser
XM_011532829.1:c.1351G>T (LHCGR)	XP_011531131.1:p.Ala451Ser
XM_011532830.1:c.1270G>T (LHCGR)	XP_011531132.1:p.Ala424Ser
XM_011532831.1:c.976G>T (LHCGR)	XP_011531133.1:p.Ala326Ser
XM_011532832.1:c.682G>T (LHCGR)	XP_011531134.1:p.Ala228Ser
XM_011532833.1:c.682G>T (LHCGR)	XP_011531135.1:p.Ala228Ser
XM_011532834.1:c.655G>T (LHCGR)	XP_011531136.1:p.Ala219Ser
XM_005264309.3:c.655G>T (LHCGR)	XP_005264366.1:p.Ala219Ser
XM_006712015.3:c.682G>T (LHCGR)	XP_006712078.1:p.Ala228Ser
XM_011532834.2:c.655G>T (LHCGR)	XP_011531136.1:p.Ala219Ser
XM_017004089.1:c.1357G>T (LHCGR)	XP_016859578.1:p.Ala453Ser
XM_017004090.1:c.976G>T (LHCGR)	XP_016859579.1:p.Ala326Ser
NM_000233.4:c.1612G>T (LHCGR) MANE Select	NP_000224.2:p.Ala538Ser
NM_001198593.2:c.3441+16505C>A (STON1-GTF2A1L)	NP_001185522.1:n.3441+16505C>A