Canonical Allele Identifier: CA346745489

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• COSMIC: COSM4904320
• MyVariant Identifiers: chr2:g.48915278A>G (hg19) ; chr2:g.48688139A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688139A>G , CM000664.2:g.48688139A>G	GRCh38
NC_000002.11:g.48915278A>G , CM000664.1:g.48915278A>G	GRCh37
NC_000002.10:g.48768782A>G	NCBI36
NG_008193.1:g.72603T>C
NG_033050.1:g.163215A>G
NG_008193.2:g.72603T>C
NG_033050.2:g.163215A>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1658T>C (LHCGR) MANE Select	ENSP00000294954.6:p.Val553Ala
ENST00000294954.11:c.1658T>C (LHCGR)	ENSP00000294954.6:p.Val553Ala
ENST00000401907.5:c.948T>C (LHCGR)	ENSP00000385406.1:p.Leu316=
ENST00000402114.6:c.3441+16459A>G (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16459A>G
ENST00000403273.5:c.*402T>C (LHCGR)	ENSP00000385847.1:n.*402T>C
ENST00000405626.5:c.1577T>C (LHCGR)	ENSP00000386033.1:p.Val526Ala
ENST00000508440.1:c.276+16459A>G (GTF2A1L)	ENSP00000421474.1:n.276+16459A>G
ENST00000602369.3:c.*220+6085T>C	ENSP00000473498.1:n.*220+6085T>C
NM_000233.3:c.1658T>C (LHCGR)	NP_000224.2:p.Val553Ala
NM_001198593.1:c.3441+16459A>G (STON1-GTF2A1L)	NP_001185522.1:n.3441+16459A>G
XM_005264309.2:c.701T>C (LHCGR)	XP_005264366.1:p.Val234Ala
XM_006712015.2:c.728T>C (LHCGR)	XP_006712078.1:p.Val243Ala
XM_011532828.1:c.1583T>C (LHCGR)	XP_011531130.1:p.Val528Ala
XM_011532829.1:c.1397T>C (LHCGR)	XP_011531131.1:p.Val466Ala
XM_011532830.1:c.1316T>C (LHCGR)	XP_011531132.1:p.Val439Ala
XM_011532831.1:c.1022T>C (LHCGR)	XP_011531133.1:p.Val341Ala
XM_011532832.1:c.728T>C (LHCGR)	XP_011531134.1:p.Val243Ala
XM_011532833.1:c.728T>C (LHCGR)	XP_011531135.1:p.Val243Ala
XM_011532834.1:c.701T>C (LHCGR)	XP_011531136.1:p.Val234Ala
XM_005264309.3:c.701T>C (LHCGR)	XP_005264366.1:p.Val234Ala
XM_006712015.3:c.728T>C (LHCGR)	XP_006712078.1:p.Val243Ala
XM_011532834.2:c.701T>C (LHCGR)	XP_011531136.1:p.Val234Ala
XM_017004089.1:c.1403T>C (LHCGR)	XP_016859578.1:p.Val468Ala
XM_017004090.1:c.1022T>C (LHCGR)	XP_016859579.1:p.Val341Ala
NM_000233.4:c.1658T>C (LHCGR) MANE Select	NP_000224.2:p.Val553Ala
NM_001198593.2:c.3441+16459A>G (STON1-GTF2A1L)	NP_001185522.1:n.3441+16459A>G