Canonical Allele Identifier: CA346743323

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• dbSNP Id: rs1391068597
• gnomAD v4: 2-48687801-C-A
• MyVariant Identifiers: chr2:g.48914940C>A (hg19) ; chr2:g.48687801C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48687801C>A , CM000664.2:g.48687801C>A	GRCh38
NC_000002.11:g.48914940C>A , CM000664.1:g.48914940C>A	GRCh37
NC_000002.10:g.48768444C>A	NCBI36
NG_008193.1:g.72941G>T
NG_033050.1:g.162877C>A
NG_008193.2:g.72941G>T
NG_033050.2:g.162877C>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1996G>T (LHCGR) MANE Select	ENSP00000294954.6:p.Gly666Cys
ENST00000294954.11:c.1996G>T (LHCGR)	ENSP00000294954.6:p.Gly666Cys
ENST00000401907.5:c.*308G>T (LHCGR)	ENSP00000385406.1:n.*308G>T
ENST00000402114.6:c.3441+16121C>A (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16121C>A
ENST00000403273.5:c.*740G>T (LHCGR)	ENSP00000385847.1:n.*740G>T
ENST00000405626.5:c.1915G>T (LHCGR)	ENSP00000386033.1:p.Gly639Cys
ENST00000508440.1:c.276+16121C>A (GTF2A1L)	ENSP00000421474.1:n.276+16121C>A
ENST00000602369.3:c.*220+6423G>T	ENSP00000473498.1:n.*220+6423G>T
NM_000233.3:c.1996G>T (LHCGR)	NP_000224.2:p.Gly666Cys
NM_001198593.1:c.3441+16121C>A (STON1-GTF2A1L)	NP_001185522.1:n.3441+16121C>A
XM_005264309.2:c.1039G>T (LHCGR)	XP_005264366.1:p.Gly347Cys
XM_006712015.2:c.1066G>T (LHCGR)	XP_006712078.1:p.Gly356Cys
XM_011532828.1:c.1921G>T (LHCGR)	XP_011531130.1:p.Gly641Cys
XM_011532829.1:c.1735G>T (LHCGR)	XP_011531131.1:p.Gly579Cys
XM_011532830.1:c.1654G>T (LHCGR)	XP_011531132.1:p.Gly552Cys
XM_011532831.1:c.1360G>T (LHCGR)	XP_011531133.1:p.Gly454Cys
XM_011532832.1:c.1066G>T (LHCGR)	XP_011531134.1:p.Gly356Cys
XM_011532833.1:c.1066G>T (LHCGR)	XP_011531135.1:p.Gly356Cys
XM_011532834.1:c.1039G>T (LHCGR)	XP_011531136.1:p.Gly347Cys
XM_005264309.3:c.1039G>T (LHCGR)	XP_005264366.1:p.Gly347Cys
XM_006712015.3:c.1066G>T (LHCGR)	XP_006712078.1:p.Gly356Cys
XM_011532834.2:c.1039G>T (LHCGR)	XP_011531136.1:p.Gly347Cys
XM_017004089.1:c.1741G>T (LHCGR)	XP_016859578.1:p.Gly581Cys
XM_017004090.1:c.1360G>T (LHCGR)	XP_016859579.1:p.Gly454Cys
NM_000233.4:c.1996G>T (LHCGR) MANE Select	NP_000224.2:p.Gly666Cys
NM_001198593.2:c.3441+16121C>A (STON1-GTF2A1L)	NP_001185522.1:n.3441+16121C>A