Canonical Allele Identifier: CA346741012

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 525666
• ClinVar RCV Id: RCV000629838 ; RCV002385975
• dbSNP Id: rs730881814
• MyVariant Identifiers: chr2:g.48026101A>C (hg19) ; chr2:g.47798962A>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47798962A>C , CM000664.2:g.47798962A>C	GRCh38
NC_000002.11:g.48026101A>C , CM000664.1:g.48026101A>C	GRCh37
NC_000002.10:g.47879605A>C	NCBI36
NG_007111.1:g.20816A>C , LRG_219:g.20816A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.682A>C (MSH6)	ENSP00000406248.2:p.Thr228Pro
ENST00000420813.6:c.682A>C (MSH6)	ENSP00000390382.2:p.Thr228Pro
ENST00000455383.6:c.682A>C (MSH6)	ENSP00000397484.2:p.Thr228Pro
ENST00000700004.2:c.979A>C (MSH6)	ENSP00000514752.2:p.Thr327Pro
ENST00000699999.1:n.1063A>C (MSH6)
ENST00000700000.1:c.979A>C (MSH6)	ENSP00000514749.1:p.Thr327Pro
ENST00000700002.1:c.985A>C (MSH6)	ENSP00000514750.1:p.Thr329Pro
ENST00000700003.1:c.627+2899A>C (MSH6)	ENSP00000514751.1:n.627+2899A>C
ENST00000700004.1:c.136A>C (MSH6)	ENSP00000514752.1:p.Thr46Pro
ENST00000234420.11:c.979A>C (MSH6) MANE Select	ENSP00000234420.5:p.Thr327Pro
ENST00000540021.6:c.589A>C (MSH6)	ENSP00000446475.1:p.Thr197Pro
ENST00000652107.1:c.682A>C (MSH6)	ENSP00000498629.1:p.Thr228Pro
ENST00000673637.1:c.682A>C (MSH6)	ENSP00000501310.1:p.Thr228Pro
ENST00000234420.9:c.979A>C (MSH6)	ENSP00000234420.4:p.Thr327Pro
ENST00000405808.5:c.169+9233T>G (FBXO11)	ENSP00000385127.1:n.169+9233T>G
ENST00000434234.5:c.*124+9032T>G (FBXO11)	ENSP00000402692.1:n.*124+9032T>G
ENST00000445503.5:c.*326A>C (MSH6)	ENSP00000405294.1:n.*326A>C
ENST00000538136.1:c.73A>C (MSH6)	ENSP00000438580.1:p.Thr25Pro
ENST00000540021.5:c.589A>C (MSH6)	ENSP00000446475.1:p.Thr197Pro
ENST00000614496.4:c.73A>C (MSH6)	ENSP00000477844.1:p.Thr25Pro
ENST00000616033.4:c.976A>C (MSH6)	ENSP00000480261.1:p.Thr326Pro
ENST00000622629.4:c.-2118A>C (MSH6)	ENSP00000482078.1:n.-2118A>C
NM_000179.2:c.979A>C , LRG_219t1:c.979A>C (MSH6)	NP_000170.1:p.Thr327Pro
NM_001281492.1:c.589A>C (MSH6)	NP_001268421.1:p.Thr197Pro
NM_001281493.1:c.73A>C (MSH6)	NP_001268422.1:p.Thr25Pro
NM_001281494.1:c.73A>C (MSH6)	NP_001268423.1:p.Thr25Pro
XM_005264271.1:c.682A>C (MSH6)	XP_005264328.1:p.Thr228Pro
XM_011532798.1:c.796A>C (MSH6)	XP_011531100.1:p.Thr266Pro
XM_011532799.1:c.682A>C (MSH6)	XP_011531101.1:p.Thr228Pro
XM_011532800.1:c.682A>C (MSH6)	XP_011531102.1:p.Thr228Pro
XM_024452819.1:c.979A>C (MSH6)	XP_024308587.1:p.Thr327Pro
XM_024452820.1:c.796A>C (MSH6)	XP_024308588.1:p.Thr266Pro
XM_024452821.1:c.682A>C (MSH6)	XP_024308589.1:p.Thr228Pro
XM_024452822.1:c.73A>C (MSH6)	XP_024308590.1:p.Thr25Pro
NM_000179.3:c.979A>C (MSH6) MANE Select	NP_000170.1:p.Thr327Pro
NM_001281492.2:c.589A>C (MSH6)	NP_001268421.1:p.Thr197Pro
NM_001281493.2:c.73A>C (MSH6)	NP_001268422.1:p.Thr25Pro
NM_001281494.2:c.73A>C (MSH6)	NP_001268423.1:p.Thr25Pro