Canonical Allele Identifier: CA346735083

Gene: MSH6

Linked Data

• ClinVar Variation Id: 480915
• ClinVar RCV Id: RCV000569470 ; RCV000695473 ; RCV003451234 ; RCV003459308 ; RCV002483526
• dbSNP Id: rs1553408388
• gnomAD v3: 2-47783453-G-T
• gnomAD v4: 2-47783453-G-T
• MyVariant Identifiers: chr2:g.48010592G>T (hg19) ; chr2:g.47783453G>T (hg38)
• PubMed: PMID:16885385 ; PMID:17909073 ; PMID:20028993 ; PMID:25980754

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47783453G>T , CM000664.2:g.47783453G>T	GRCh38
NC_000002.11:g.48010592G>T , CM000664.1:g.48010592G>T	GRCh37
NC_000002.10:g.47864096G>T	NCBI36
NG_007111.1:g.5307G>T , LRG_219:g.5307G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000700004.2:c.220G>T	ENSP00000514752.2:p.Gly74Ter
ENST00000699999.1:n.304G>T
ENST00000700000.1:c.220G>T	ENSP00000514749.1:p.Gly74Ter
ENST00000700001.1:n.292G>T
ENST00000700002.1:c.220G>T	ENSP00000514750.1:p.Gly74Ter
ENST00000700003.1:c.220G>T	ENSP00000514751.1:p.Gly74Ter
ENST00000234420.11:c.220G>T MANE Select	ENSP00000234420.5:p.Gly74Ter
ENST00000540021.6:c.220G>T	ENSP00000446475.1:p.Gly74Ter
ENST00000652107.1:c.-37-7474G>T	ENSP00000498629.1:n.-37-7474G>T
ENST00000673637.1:c.-38+222G>T	ENSP00000501310.1:n.-38+222G>T
ENST00000673922.1:n.309G>T
ENST00000234420.9:c.220G>T	ENSP00000234420.4:p.Gly74Ter
ENST00000445503.5:c.220G>T	ENSP00000405294.1:p.Gly74Ter
ENST00000456246.1:c.220G>T	ENSP00000410570.1:p.Gly74Ter
ENST00000493177.1:n.284G>T
ENST00000540021.5:c.220G>T	ENSP00000446475.1:p.Gly74Ter
ENST00000606499.1:c.-37-7474G>T	ENSP00000475605.1:n.-37-7474G>T
ENST00000614496.4:c.-517G>T	ENSP00000477844.1:n.-517G>T
ENST00000616033.4:c.217G>T	ENSP00000480261.1:p.Gly73Ter
ENST00000622629.4:c.-2877G>T	ENSP00000482078.1:n.-2877G>T
NM_000179.2:c.220G>T , LRG_219t1:c.220G>T	NP_000170.1:p.Gly74Ter
NM_001281492.1:c.220G>T	NP_001268421.1:p.Gly74Ter
NM_001281493.1:c.-517G>T	NP_001268422.1:n.-517G>T
XM_011532800.1:c.-38+222G>T	XP_011531102.1:n.-38+222G>T
XM_024452819.1:c.220G>T	XP_024308587.1:p.Gly74Ter
XM_024452822.1:c.-517G>T	XP_024308590.1:n.-517G>T
NM_000179.3:c.220G>T MANE Select	NP_000170.1:p.Gly74Ter
NM_001281492.2:c.220G>T	NP_001268421.1:p.Gly74Ter
NM_001281493.2:c.-517G>T	NP_001268422.1:n.-517G>T