Canonical Allele Identifier: CA346729933

Gene: MSH2

Linked Data

• dbSNP Id: rs1553369737
• MyVariant Identifiers: chr2:g.47705538T>A (hg19) ; chr2:g.47478399T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47478399T>A , CM000664.2:g.47478399T>A	GRCh38
NC_000002.11:g.47705538T>A , CM000664.1:g.47705538T>A	GRCh37
NC_000002.10:g.47559042T>A	NCBI36
NG_007110.2:g.80276T>A , LRG_218:g.80276T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2338T>A	ENSP00000495641.2:p.Phe780Ile
ENST00000233146.7:c.2338T>A MANE Select	ENSP00000233146.2:p.Phe780Ile
ENST00000543555.6:c.2140T>A	ENSP00000442697.1:p.Phe714Ile
ENST00000644092.1:c.*638T>A	ENSP00000496351.1:n.*638T>A
ENST00000644900.1:c.191T>A
ENST00000645339.1:c.2338T>A	ENSP00000496441.1:p.Phe780Ile
ENST00000645506.1:c.2338T>A	ENSP00000495455.1:p.Phe780Ile
ENST00000646415.1:c.2338T>A	ENSP00000495543.1:p.Phe780Ile
ENST00000233146.6:c.2338T>A	ENSP00000233146.2:p.Phe780Ile
ENST00000406134.5:c.2338T>A	ENSP00000384199.1:p.Phe780Ile
ENST00000543555.5:c.2140T>A	ENSP00000442697.1:p.Phe714Ile
ENST00000610696.4:c.*734T>A	ENSP00000483159.1:n.*734T>A
ENST00000613514.4:c.*878T>A	ENSP00000484137.1:n.*878T>A
ENST00000617333.3:c.*1104T>A	ENSP00000482468.1:n.*1104T>A
ENST00000617938.4:c.*1310T>A	ENSP00000481158.1:n.*1310T>A
ENST00000621359.2:c.2338T>A	ENSP00000481416.1:p.Phe780Ile
NM_000251.2:c.2338T>A , LRG_218t1:c.2338T>A	NP_000242.1:p.Phe780Ile
NM_001258281.1:c.2140T>A	NP_001245210.1:p.Phe714Ile
XM_005264332.2:c.2338T>A	XP_005264389.2:p.Phe780Ile
XM_011532867.1:c.2338T>A	XP_011531169.1:p.Phe780Ile
XR_939685.1:n.2410T>A
XM_005264332.4:c.2338T>A	XP_005264389.2:p.Phe780Ile
XM_011532867.2:c.2338T>A	XP_011531169.1:p.Phe780Ile
XR_001738747.2:n.2400T>A
XR_939685.2:n.2400T>A
NM_000251.3:c.2338T>A MANE Select	NP_000242.1:p.Phe780Ile