Canonical Allele Identifier: CA346729131

Gene: MSH2

Linked Data

• ClinVar Variation Id: 483690
• ClinVar RCV Id: RCV000568876 ; RCV001858298 ; RCV003451248
• dbSNP Id: rs1203462814
• MyVariant Identifiers: chr2:g.47703539G>C (hg19) ; chr2:g.47476400G>C (hg38)
• PubMed: PMID:21642682

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47476400G>C , CM000664.2:g.47476400G>C	GRCh38
NC_000002.11:g.47703539G>C , CM000664.1:g.47703539G>C	GRCh37
NC_000002.10:g.47557043G>C	NCBI36
NG_007110.2:g.78277G>C , LRG_218:g.78277G>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.2039G>C	ENSP00000495641.2:p.Arg680Pro
ENST00000233146.7:c.2039G>C MANE Select	ENSP00000233146.2:p.Arg680Pro
ENST00000543555.6:c.1841G>C	ENSP00000442697.1:p.Arg614Pro
ENST00000644092.1:c.*339G>C	ENSP00000496351.1:n.*339G>C
ENST00000645339.1:c.2039G>C	ENSP00000496441.1:p.Arg680Pro
ENST00000645506.1:c.2039G>C	ENSP00000495455.1:p.Arg680Pro
ENST00000646415.1:c.2039G>C	ENSP00000495543.1:p.Arg680Pro
ENST00000233146.6:c.2039G>C	ENSP00000233146.2:p.Arg680Pro
ENST00000406134.5:c.2039G>C	ENSP00000384199.1:p.Arg680Pro
ENST00000543555.5:c.1841G>C	ENSP00000442697.1:p.Arg614Pro
ENST00000610696.4:c.*435G>C	ENSP00000483159.1:n.*435G>C
ENST00000613514.4:c.*579G>C	ENSP00000484137.1:n.*579G>C
ENST00000617333.3:c.*805G>C	ENSP00000482468.1:n.*805G>C
ENST00000617938.4:c.*1011G>C	ENSP00000481158.1:n.*1011G>C
ENST00000621359.2:c.2039G>C	ENSP00000481416.1:p.Arg680Pro
NM_000251.2:c.2039G>C , LRG_218t1:c.2039G>C	NP_000242.1:p.Arg680Pro
NM_001258281.1:c.1841G>C	NP_001245210.1:p.Arg614Pro
XM_005264332.2:c.2039G>C	XP_005264389.2:p.Arg680Pro
XM_011532867.1:c.2039G>C	XP_011531169.1:p.Arg680Pro
XR_939685.1:n.2111G>C
XM_005264332.4:c.2039G>C	XP_005264389.2:p.Arg680Pro
XM_011532867.2:c.2039G>C	XP_011531169.1:p.Arg680Pro
XR_001738747.2:n.2101G>C
XR_939685.2:n.2101G>C
NM_000251.3:c.2039G>C MANE Select	NP_000242.1:p.Arg680Pro