Canonical Allele Identifier: CA340177025

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46658261A>T (hg19) ; chr1:g.46192589A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46192589A>T , CM000663.2:g.46192589A>T	GRCh38
NC_000001.10:g.46658261A>T , CM000663.1:g.46658261A>T	GRCh37
NC_000001.9:g.46430848A>T	NCBI36
NG_009205.2:g.32717T>A
NG_009205.3:g.32717T>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1213T>A (POMGNT1)	ENSP00000379698.4:p.Phe405Ile
ENST00000477114.2:n.1775T>A (POMGNT1)
ENST00000497439.6:n.1385T>A (POMGNT1)
ENST00000684817.1:n.1573T>A (POMGNT1)
ENST00000684898.1:n.1775T>A (POMGNT1)
ENST00000685230.1:c.*523T>A (POMGNT1)	ENSP00000510305.1:n.*523T>A
ENST00000685275.1:n.1760T>A (POMGNT1)
ENST00000685444.1:c.1114T>A (POMGNT1)	ENSP00000510762.1:p.Phe372Ile
ENST00000685704.1:n.1775T>A (POMGNT1)
ENST00000685775.1:n.2740T>A (POMGNT1)
ENST00000685833.1:n.2091T>A (POMGNT1)
ENST00000686252.1:n.2287T>A (POMGNT1)
ENST00000686379.1:c.*337T>A (POMGNT1)	ENSP00000508913.1:n.*337T>A
ENST00000686724.1:n.1385T>A (POMGNT1)
ENST00000686737.1:c.1213T>A (POMGNT1)	ENSP00000508736.1:p.Phe405Ile
ENST00000687112.1:n.2079T>A (POMGNT1)
ENST00000687149.1:c.1213T>A (POMGNT1)	ENSP00000509745.1:p.Phe405Ile
ENST00000687197.1:c.*153T>A (POMGNT1)	ENSP00000510749.1:n.*153T>A
ENST00000687235.1:n.1775T>A (POMGNT1)
ENST00000687613.1:n.1963T>A (POMGNT1)
ENST00000687683.1:c.1213T>A (POMGNT1)	ENSP00000508522.1:p.Phe405Ile
ENST00000688032.1:n.1775T>A (POMGNT1)
ENST00000688596.1:n.1864T>A (POMGNT1)
ENST00000688608.1:c.1114T>A (POMGNT1)	ENSP00000508890.1:p.Phe372Ile
ENST00000688919.1:n.2409T>A (POMGNT1)
ENST00000689031.1:n.1775T>A (POMGNT1)
ENST00000689717.1:n.1385T>A (POMGNT1)
ENST00000689756.1:c.*845T>A (POMGNT1)	ENSP00000509023.1:n.*845T>A
ENST00000690377.1:n.1560T>A (POMGNT1)
ENST00000690678.1:c.1213T>A (POMGNT1)	ENSP00000508703.1:p.Phe405Ile
ENST00000691209.1:c.*153T>A (POMGNT1)	ENSP00000510112.1:n.*153T>A
ENST00000691243.1:c.1213T>A (POMGNT1)	ENSP00000510654.1:p.Phe405Ile
ENST00000692169.1:n.1362T>A (POMGNT1)
ENST00000692202.1:n.1788T>A (POMGNT1)
ENST00000692322.1:c.*1065T>A (POMGNT1)	ENSP00000509017.1:n.*1065T>A
ENST00000692369.1:c.1213T>A (POMGNT1)	ENSP00000508453.1:p.Phe405Ile
ENST00000692599.1:n.1775T>A (POMGNT1)
ENST00000692635.1:c.*153T>A (POMGNT1)	ENSP00000508425.1:n.*153T>A
ENST00000693168.1:n.1474T>A (POMGNT1)
ENST00000693218.1:c.1213T>A (POMGNT1)	ENSP00000510577.1:p.Phe405Ile
ENST00000693223.1:n.2161T>A (POMGNT1)
ENST00000693365.1:n.3847T>A (POMGNT1)
ENST00000371984.8:c.1213T>A (POMGNT1) MANE Select	ENSP00000361052.3:p.Phe405Ile
ENST00000371984.7:c.1213T>A (POMGNT1)	ENSP00000361052.3:p.Phe405Ile
ENST00000371992.1:c.1213T>A (POMGNT1)	ENSP00000361060.1:p.Phe405Ile
ENST00000396420.7:c.*882T>A (POMGNT1)	ENSP00000379698.3:n.*882T>A
ENST00000485714.1:n.599T>A (POMGNT1)
NM_001243766.1:c.1213T>A (POMGNT1)	NP_001230695.1:p.Phe405Ile
NM_001290129.1:c.1147T>A (POMGNT1)	NP_001277058.1:p.Phe383Ile
NM_001290130.1:c.784T>A (POMGNT1)	NP_001277059.1:p.Phe262Ile
NM_017739.3:c.1213T>A (POMGNT1)	NP_060209.3:p.Phe405Ile
XM_005271010.1:c.1213T>A (POMGNT1)	XP_005271067.1:p.Phe405Ile
XM_006710755.1:c.1213T>A (POMGNT1)	XP_006710818.1:p.Phe405Ile
XM_006710756.1:c.1213T>A (POMGNT1)	XP_006710819.1:p.Phe405Ile
XM_011540460.1:c.679-3613A>T (TSPAN1)	XP_011538762.1:n.679-3613A>T
XM_011540461.1:c.634-3613A>T (TSPAN1)	XP_011538763.1:n.634-3613A>T
XM_011541759.1:c.1147T>A (POMGNT1)	XP_011540061.1:p.Phe383Ile
XM_011541760.1:c.1147T>A (POMGNT1)	XP_011540062.1:p.Phe383Ile
XM_011541761.1:c.121T>A (POMGNT1)	XP_011540063.1:p.Phe41Ile
XR_946706.1:n.1373T>A (POMGNT1)
XM_011540460.3:c.679-3613A>T (TSPAN1)	XP_011538762.1:n.679-3613A>T
XM_011541760.3:c.1147T>A (POMGNT1)	XP_011540062.1:p.Phe383Ile
XM_017001690.1:c.1213T>A (POMGNT1)	XP_016857179.1:p.Phe405Ile
NM_001243766.2:c.1213T>A (POMGNT1)	NP_001230695.2:p.Phe405Ile
NM_001290129.2:c.1147T>A (POMGNT1)	NP_001277058.2:p.Phe383Ile
NM_001290130.2:c.784T>A (POMGNT1)	NP_001277059.2:p.Phe262Ile
NM_017739.4:c.1213T>A (POMGNT1) MANE Select	NP_060209.4:p.Phe405Ile