Canonical Allele Identifier: CA340173658

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46657839G>C (hg19) ; chr1:g.46192167G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46192167G>C , CM000663.2:g.46192167G>C	GRCh38
NC_000001.10:g.46657839G>C , CM000663.1:g.46657839G>C	GRCh37
NC_000001.9:g.46430426G>C	NCBI36
NG_009205.2:g.33139C>G
NG_009205.3:g.33139C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1470C>G (POMGNT1)	ENSP00000379698.4:p.Cys490Trp
ENST00000477114.2:n.2032C>G (POMGNT1)
ENST00000497439.6:n.1642C>G (POMGNT1)
ENST00000684817.1:n.1830C>G (POMGNT1)
ENST00000684898.1:n.2032C>G (POMGNT1)
ENST00000685230.1:c.*780C>G (POMGNT1)	ENSP00000510305.1:n.*780C>G
ENST00000685275.1:n.2017C>G (POMGNT1)
ENST00000685444.1:c.1371C>G (POMGNT1)	ENSP00000510762.1:p.Cys457Trp
ENST00000685704.1:n.2032C>G (POMGNT1)
ENST00000685775.1:n.2997C>G (POMGNT1)
ENST00000685833.1:n.2348C>G (POMGNT1)
ENST00000686252.1:n.2544C>G (POMGNT1)
ENST00000686379.1:c.*594C>G (POMGNT1)	ENSP00000508913.1:n.*594C>G
ENST00000686724.1:n.1642C>G (POMGNT1)
ENST00000686737.1:c.1470C>G (POMGNT1)	ENSP00000508736.1:p.Cys490Trp
ENST00000687112.1:n.2336C>G (POMGNT1)
ENST00000687149.1:c.1470C>G (POMGNT1)	ENSP00000509745.1:p.Cys490Trp
ENST00000687197.1:c.*410C>G (POMGNT1)	ENSP00000510749.1:n.*410C>G
ENST00000687235.1:n.2032C>G (POMGNT1)
ENST00000687613.1:n.2220C>G (POMGNT1)
ENST00000687683.1:c.1470C>G (POMGNT1)	ENSP00000508522.1:p.Cys490Trp
ENST00000688032.1:n.2032C>G (POMGNT1)
ENST00000688596.1:n.2121C>G (POMGNT1)
ENST00000688608.1:c.1371C>G (POMGNT1)	ENSP00000508890.1:p.Cys457Trp
ENST00000688919.1:n.2666C>G (POMGNT1)
ENST00000689031.1:n.2032C>G (POMGNT1)
ENST00000689717.1:n.1642C>G (POMGNT1)
ENST00000689756.1:c.*1102C>G (POMGNT1)	ENSP00000509023.1:n.*1102C>G
ENST00000690377.1:n.1817C>G (POMGNT1)
ENST00000690678.1:c.1470C>G (POMGNT1)	ENSP00000508703.1:p.Cys490Trp
ENST00000691209.1:c.*410C>G (POMGNT1)	ENSP00000510112.1:n.*410C>G
ENST00000691243.1:c.1470C>G (POMGNT1)	ENSP00000510654.1:p.Cys490Trp
ENST00000692169.1:n.1619C>G (POMGNT1)
ENST00000692202.1:n.2045C>G (POMGNT1)
ENST00000692322.1:c.*1322C>G (POMGNT1)	ENSP00000509017.1:n.*1322C>G
ENST00000692369.1:c.1470C>G (POMGNT1)	ENSP00000508453.1:p.Cys490Trp
ENST00000692599.1:n.2032C>G (POMGNT1)
ENST00000692635.1:c.*410C>G (POMGNT1)	ENSP00000508425.1:n.*410C>G
ENST00000693168.1:n.1731C>G (POMGNT1)
ENST00000693218.1:c.1470C>G (POMGNT1)	ENSP00000510577.1:p.Cys490Trp
ENST00000693223.1:n.2418C>G (POMGNT1)
ENST00000693365.1:n.4104C>G (POMGNT1)
ENST00000371984.8:c.1470C>G (POMGNT1) MANE Select	ENSP00000361052.3:p.Cys490Trp
ENST00000371984.7:c.1470C>G (POMGNT1)	ENSP00000361052.3:p.Cys490Trp
ENST00000371992.1:c.1470C>G (POMGNT1)	ENSP00000361060.1:p.Cys490Trp
ENST00000396420.7:c.*1139C>G (POMGNT1)	ENSP00000379698.3:n.*1139C>G
ENST00000463030.1:n.91C>G (POMGNT1)
ENST00000485714.1:n.856C>G (POMGNT1)
NM_001243766.1:c.1470C>G (POMGNT1)	NP_001230695.1:p.Cys490Trp
NM_001290129.1:c.1404C>G (POMGNT1)	NP_001277058.1:p.Cys468Trp
NM_001290130.1:c.1041C>G (POMGNT1)	NP_001277059.1:p.Cys347Trp
NM_017739.3:c.1470C>G (POMGNT1)	NP_060209.3:p.Cys490Trp
XM_005271010.1:c.1470C>G (POMGNT1)	XP_005271067.1:p.Cys490Trp
XM_006710755.1:c.1470C>G (POMGNT1)	XP_006710818.1:p.Cys490Trp
XM_006710756.1:c.1470C>G (POMGNT1)	XP_006710819.1:p.Cys490Trp
XM_011540460.1:c.679-4035G>C (TSPAN1)	XP_011538762.1:n.679-4035G>C
XM_011540461.1:c.634-4035G>C (TSPAN1)	XP_011538763.1:n.634-4035G>C
XM_011541759.1:c.1404C>G (POMGNT1)	XP_011540061.1:p.Cys468Trp
XM_011541760.1:c.1404C>G (POMGNT1)	XP_011540062.1:p.Cys468Trp
XM_011541761.1:c.378C>G (POMGNT1)	XP_011540063.1:p.Cys126Trp
XR_946706.1:n.1630C>G (POMGNT1)
XM_011540460.3:c.679-4035G>C (TSPAN1)	XP_011538762.1:n.679-4035G>C
XM_011541760.3:c.1404C>G (POMGNT1)	XP_011540062.1:p.Cys468Trp
XM_017001690.1:c.1470C>G (POMGNT1)	XP_016857179.1:p.Cys490Trp
NM_001243766.2:c.1470C>G (POMGNT1)	NP_001230695.2:p.Cys490Trp
NM_001290129.2:c.1404C>G (POMGNT1)	NP_001277058.2:p.Cys468Trp
NM_001290130.2:c.1041C>G (POMGNT1)	NP_001277059.2:p.Cys347Trp
NM_017739.4:c.1470C>G (POMGNT1) MANE Select	NP_060209.4:p.Cys490Trp