Canonical Allele Identifier: CA340171839
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

dbSNP Id: rs1174476109
gnomAD v2: 1-46656184-T-C
gnomAD v3: 1-46190512-T-C
gnomAD v4: 1-46190512-T-C

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46190512T>C , CM000663.2:g.46190512T>C GRCh38
NC_000001.10:g.46656184T>C , CM000663.1:g.46656184T>C GRCh37
NC_000001.9:g.46428771T>C NCBI36
NG_009205.2:g.34794A>G
NG_009205.3:g.34794A>G

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1610A>G (POMGNT1) ENSP00000379698.4:p.Lys537Arg
ENST00000477114.2:n.2172A>G (POMGNT1)
ENST00000497439.6:n.1782A>G (POMGNT1)
ENST00000684817.1:n.1970A>G (POMGNT1)
ENST00000684898.1:n.2172A>G (POMGNT1)
ENST00000685230.1:c.*920A>G (POMGNT1) ENSP00000510305.1:n.*920A>G
ENST00000685275.1:n.2157A>G (POMGNT1)
ENST00000685444.1:c.1511A>G (POMGNT1) ENSP00000510762.1:p.Lys504Arg
ENST00000685704.1:n.2276A>G (POMGNT1)
ENST00000685775.1:n.4652A>G (POMGNT1)
ENST00000685833.1:n.4003A>G (POMGNT1)
ENST00000686252.1:n.2684A>G (POMGNT1)
ENST00000686379.1:c.*734A>G (POMGNT1) ENSP00000508913.1:n.*734A>G
ENST00000686724.1:n.3297A>G (POMGNT1)
ENST00000686737.1:c.1610A>G (POMGNT1) ENSP00000508736.1:p.Lys537Arg
ENST00000687112.1:n.2476A>G (POMGNT1)
ENST00000687149.1:c.1649A>G (POMGNT1) ENSP00000509745.1:p.Lys550Arg
ENST00000687197.1:c.*550A>G (POMGNT1) ENSP00000510749.1:n.*550A>G
ENST00000687235.1:n.3687A>G (POMGNT1)
ENST00000687613.1:n.2290-523A>G (POMGNT1)
ENST00000687683.1:c.1610A>G (POMGNT1) ENSP00000508522.1:p.Lys537Arg
ENST00000688032.1:n.2147A>G (POMGNT1)
ENST00000688596.1:n.2261A>G (POMGNT1)
ENST00000688608.1:c.1511A>G (POMGNT1) ENSP00000508890.1:p.Lys504Arg
ENST00000688919.1:n.3008A>G (POMGNT1)
ENST00000689031.1:n.2102-523A>G (POMGNT1)
ENST00000689717.1:n.1984A>G (POMGNT1)
ENST00000689756.1:c.*1242A>G (POMGNT1) ENSP00000509023.1:n.*1242A>G
ENST00000690377.1:n.1957A>G (POMGNT1)
ENST00000690678.1:c.1610A>G (POMGNT1) ENSP00000508703.1:p.Lys537Arg
ENST00000691209.1:c.*550A>G (POMGNT1) ENSP00000510112.1:n.*550A>G
ENST00000691243.1:c.*1A>G (POMGNT1) ENSP00000510654.1:n.*1A>G
ENST00000692169.1:n.3274A>G (POMGNT1)
ENST00000692202.1:n.2185A>G (POMGNT1)
ENST00000692322.1:c.*1397A>G (POMGNT1) ENSP00000509017.1:n.*1397A>G
ENST00000692369.1:c.1610A>G (POMGNT1) ENSP00000508453.1:p.Lys537Arg
ENST00000692599.1:n.3485A>G (POMGNT1)
ENST00000692635.1:c.*485A>G (POMGNT1) ENSP00000508425.1:n.*485A>G
ENST00000693168.1:n.3386A>G (POMGNT1)
ENST00000693218.1:c.*171A>G (POMGNT1) ENSP00000510577.1:n.*171A>G
ENST00000693223.1:n.2558A>G (POMGNT1)
ENST00000693365.1:n.5759A>G (POMGNT1)
ENST00000371984.8:c.1610A>G (POMGNT1) MANE Select ENSP00000361052.3:p.Lys537Arg
ENST00000371984.7:c.1610A>G (POMGNT1) ENSP00000361052.3:p.Lys537Arg
ENST00000371992.1:c.1610A>G (POMGNT1) ENSP00000361060.1:p.Lys537Arg
ENST00000396420.7:c.*1279A>G (POMGNT1) ENSP00000379698.3:n.*1279A>G
ENST00000480972.1:n.259A>G (POMGNT1)
ENST00000485714.1:n.2511A>G (POMGNT1)
NM_001243766.1:c.1610A>G (POMGNT1) NP_001230695.1:p.Lys537Arg
NM_001290129.1:c.1544A>G (POMGNT1) NP_001277058.1:p.Lys515Arg
NM_001290130.1:c.1181A>G (POMGNT1) NP_001277059.1:p.Lys394Arg
NM_017739.3:c.1610A>G (POMGNT1) NP_060209.3:p.Lys537Arg
XM_005271010.1:c.1610A>G (POMGNT1) XP_005271067.1:p.Lys537Arg
XM_006710755.1:c.1610A>G (POMGNT1) XP_006710818.1:p.Lys537Arg
XM_006710756.1:c.1610A>G (POMGNT1) XP_006710819.1:p.Lys537Arg
XM_011540460.1:c.678+5204T>C (TSPAN1) XP_011538762.1:n.678+5204T>C
XM_011540461.1:c.633+5204T>C (TSPAN1) XP_011538763.1:n.633+5204T>C
XM_011541759.1:c.1544A>G (POMGNT1) XP_011540061.1:p.Lys515Arg
XM_011541760.1:c.1544A>G (POMGNT1) XP_011540062.1:p.Lys515Arg
XM_011541761.1:c.518A>G (POMGNT1) XP_011540063.1:p.Lys173Arg
XM_011540460.3:c.678+5204T>C (TSPAN1) XP_011538762.1:n.678+5204T>C
XM_011541760.3:c.1544A>G (POMGNT1) XP_011540062.1:p.Lys515Arg
XM_017001690.1:c.1610A>G (POMGNT1) XP_016857179.1:p.Lys537Arg
NM_001243766.2:c.1610A>G (POMGNT1) NP_001230695.2:p.Lys537Arg
NM_001290129.2:c.1544A>G (POMGNT1) NP_001277058.2:p.Lys515Arg
NM_001290130.2:c.1181A>G (POMGNT1) NP_001277059.2:p.Lys394Arg
NM_017739.4:c.1610A>G (POMGNT1) MANE Select NP_060209.4:p.Lys537Arg