Canonical Allele Identifier: CA340171834

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46656182T>C (hg19) ; chr1:g.46190510T>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46190510T>C , CM000663.2:g.46190510T>C	GRCh38
NC_000001.10:g.46656182T>C , CM000663.1:g.46656182T>C	GRCh37
NC_000001.9:g.46428769T>C	NCBI36
NG_009205.2:g.34796A>G
NG_009205.3:g.34796A>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1612A>G (POMGNT1)	ENSP00000379698.4:p.Lys538Glu
ENST00000477114.2:n.2174A>G (POMGNT1)
ENST00000497439.6:n.1784A>G (POMGNT1)
ENST00000684817.1:n.1972A>G (POMGNT1)
ENST00000684898.1:n.2174A>G (POMGNT1)
ENST00000685230.1:c.*922A>G (POMGNT1)	ENSP00000510305.1:n.*922A>G
ENST00000685275.1:n.2159A>G (POMGNT1)
ENST00000685444.1:c.1513A>G (POMGNT1)	ENSP00000510762.1:p.Lys505Glu
ENST00000685704.1:n.2278A>G (POMGNT1)
ENST00000685775.1:n.4654A>G (POMGNT1)
ENST00000685833.1:n.4005A>G (POMGNT1)
ENST00000686252.1:n.2686A>G (POMGNT1)
ENST00000686379.1:c.*736A>G (POMGNT1)	ENSP00000508913.1:n.*736A>G
ENST00000686724.1:n.3299A>G (POMGNT1)
ENST00000686737.1:c.1612A>G (POMGNT1)	ENSP00000508736.1:p.Lys538Glu
ENST00000687112.1:n.2478A>G (POMGNT1)
ENST00000687149.1:c.1651A>G (POMGNT1)	ENSP00000509745.1:p.Lys551Glu
ENST00000687197.1:c.*552A>G (POMGNT1)	ENSP00000510749.1:n.*552A>G
ENST00000687235.1:n.3689A>G (POMGNT1)
ENST00000687613.1:n.2290-521A>G (POMGNT1)
ENST00000687683.1:c.1612A>G (POMGNT1)	ENSP00000508522.1:p.Lys538Glu
ENST00000688032.1:n.2149A>G (POMGNT1)
ENST00000688596.1:n.2263A>G (POMGNT1)
ENST00000688608.1:c.1513A>G (POMGNT1)	ENSP00000508890.1:p.Lys505Glu
ENST00000688919.1:n.3010A>G (POMGNT1)
ENST00000689031.1:n.2102-521A>G (POMGNT1)
ENST00000689717.1:n.1986A>G (POMGNT1)
ENST00000689756.1:c.*1244A>G (POMGNT1)	ENSP00000509023.1:n.*1244A>G
ENST00000690377.1:n.1959A>G (POMGNT1)
ENST00000690678.1:c.1612A>G (POMGNT1)	ENSP00000508703.1:p.Lys538Glu
ENST00000691209.1:c.*552A>G (POMGNT1)	ENSP00000510112.1:n.*552A>G
ENST00000691243.1:c.*3A>G (POMGNT1)	ENSP00000510654.1:n.*3A>G
ENST00000692169.1:n.3276A>G (POMGNT1)
ENST00000692202.1:n.2187A>G (POMGNT1)
ENST00000692322.1:c.*1399A>G (POMGNT1)	ENSP00000509017.1:n.*1399A>G
ENST00000692369.1:c.1612A>G (POMGNT1)	ENSP00000508453.1:p.Lys538Glu
ENST00000692599.1:n.3487A>G (POMGNT1)
ENST00000692635.1:c.*487A>G (POMGNT1)	ENSP00000508425.1:n.*487A>G
ENST00000693168.1:n.3388A>G (POMGNT1)
ENST00000693218.1:c.*173A>G (POMGNT1)	ENSP00000510577.1:n.*173A>G
ENST00000693223.1:n.2560A>G (POMGNT1)
ENST00000693365.1:n.5761A>G (POMGNT1)
ENST00000371984.8:c.1612A>G (POMGNT1) MANE Select	ENSP00000361052.3:p.Lys538Glu
ENST00000371984.7:c.1612A>G (POMGNT1)	ENSP00000361052.3:p.Lys538Glu
ENST00000371992.1:c.1612A>G (POMGNT1)	ENSP00000361060.1:p.Lys538Glu
ENST00000396420.7:c.*1281A>G (POMGNT1)	ENSP00000379698.3:n.*1281A>G
ENST00000480972.1:n.261A>G (POMGNT1)
ENST00000485714.1:n.2513A>G (POMGNT1)
NM_001243766.1:c.1612A>G (POMGNT1)	NP_001230695.1:p.Lys538Glu
NM_001290129.1:c.1546A>G (POMGNT1)	NP_001277058.1:p.Lys516Glu
NM_001290130.1:c.1183A>G (POMGNT1)	NP_001277059.1:p.Lys395Glu
NM_017739.3:c.1612A>G (POMGNT1)	NP_060209.3:p.Lys538Glu
XM_005271010.1:c.1612A>G (POMGNT1)	XP_005271067.1:p.Lys538Glu
XM_006710755.1:c.1612A>G (POMGNT1)	XP_006710818.1:p.Lys538Glu
XM_006710756.1:c.1612A>G (POMGNT1)	XP_006710819.1:p.Lys538Glu
XM_011540460.1:c.678+5202T>C (TSPAN1)	XP_011538762.1:n.678+5202T>C
XM_011540461.1:c.633+5202T>C (TSPAN1)	XP_011538763.1:n.633+5202T>C
XM_011541759.1:c.1546A>G (POMGNT1)	XP_011540061.1:p.Lys516Glu
XM_011541760.1:c.1546A>G (POMGNT1)	XP_011540062.1:p.Lys516Glu
XM_011541761.1:c.520A>G (POMGNT1)	XP_011540063.1:p.Lys174Glu
XM_011540460.3:c.678+5202T>C (TSPAN1)	XP_011538762.1:n.678+5202T>C
XM_011541760.3:c.1546A>G (POMGNT1)	XP_011540062.1:p.Lys516Glu
XM_017001690.1:c.1612A>G (POMGNT1)	XP_016857179.1:p.Lys538Glu
NM_001243766.2:c.1612A>G (POMGNT1)	NP_001230695.2:p.Lys538Glu
NM_001290129.2:c.1546A>G (POMGNT1)	NP_001277058.2:p.Lys516Glu
NM_001290130.2:c.1183A>G (POMGNT1)	NP_001277059.2:p.Lys395Glu
NM_017739.4:c.1612A>G (POMGNT1) MANE Select	NP_060209.4:p.Lys538Glu