Canonical Allele Identifier: CA340171821

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46656177T>G (hg19) ; chr1:g.46190505T>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46190505T>G , CM000663.2:g.46190505T>G	GRCh38
NC_000001.10:g.46656177T>G , CM000663.1:g.46656177T>G	GRCh37
NC_000001.9:g.46428764T>G	NCBI36
NG_009205.2:g.34801A>C
NG_009205.3:g.34801A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1617A>C (POMGNT1)	ENSP00000379698.4:p.Glu539Asp
ENST00000477114.2:n.2179A>C (POMGNT1)
ENST00000497439.6:n.1789A>C (POMGNT1)
ENST00000684817.1:n.1977A>C (POMGNT1)
ENST00000684898.1:n.2179A>C (POMGNT1)
ENST00000685230.1:c.*927A>C (POMGNT1)	ENSP00000510305.1:n.*927A>C
ENST00000685275.1:n.2164A>C (POMGNT1)
ENST00000685444.1:c.1518A>C (POMGNT1)	ENSP00000510762.1:p.Glu506Asp
ENST00000685704.1:n.2283A>C (POMGNT1)
ENST00000685775.1:n.4659A>C (POMGNT1)
ENST00000685833.1:n.4010A>C (POMGNT1)
ENST00000686252.1:n.2691A>C (POMGNT1)
ENST00000686379.1:c.*741A>C (POMGNT1)	ENSP00000508913.1:n.*741A>C
ENST00000686724.1:n.3304A>C (POMGNT1)
ENST00000686737.1:c.1617A>C (POMGNT1)	ENSP00000508736.1:p.Glu539Asp
ENST00000687112.1:n.2483A>C (POMGNT1)
ENST00000687149.1:c.1656A>C (POMGNT1)	ENSP00000509745.1:p.Glu552Asp
ENST00000687197.1:c.*557A>C (POMGNT1)	ENSP00000510749.1:n.*557A>C
ENST00000687235.1:n.3694A>C (POMGNT1)
ENST00000687613.1:n.2290-516A>C (POMGNT1)
ENST00000687683.1:c.1617A>C (POMGNT1)	ENSP00000508522.1:p.Glu539Asp
ENST00000688032.1:n.2154A>C (POMGNT1)
ENST00000688596.1:n.2268A>C (POMGNT1)
ENST00000688608.1:c.1518A>C (POMGNT1)	ENSP00000508890.1:p.Glu506Asp
ENST00000688919.1:n.3015A>C (POMGNT1)
ENST00000689031.1:n.2102-516A>C (POMGNT1)
ENST00000689717.1:n.1991A>C (POMGNT1)
ENST00000689756.1:c.*1249A>C (POMGNT1)	ENSP00000509023.1:n.*1249A>C
ENST00000690377.1:n.1964A>C (POMGNT1)
ENST00000690678.1:c.1617A>C (POMGNT1)	ENSP00000508703.1:p.Glu539Asp
ENST00000691209.1:c.*557A>C (POMGNT1)	ENSP00000510112.1:n.*557A>C
ENST00000691243.1:c.*8A>C (POMGNT1)	ENSP00000510654.1:n.*8A>C
ENST00000692169.1:n.3281A>C (POMGNT1)
ENST00000692202.1:n.2192A>C (POMGNT1)
ENST00000692322.1:c.*1404A>C (POMGNT1)	ENSP00000509017.1:n.*1404A>C
ENST00000692369.1:c.1617A>C (POMGNT1)	ENSP00000508453.1:p.Glu539Asp
ENST00000692599.1:n.3492A>C (POMGNT1)
ENST00000692635.1:c.*492A>C (POMGNT1)	ENSP00000508425.1:n.*492A>C
ENST00000693168.1:n.3393A>C (POMGNT1)
ENST00000693218.1:c.*178A>C (POMGNT1)	ENSP00000510577.1:n.*178A>C
ENST00000693223.1:n.2565A>C (POMGNT1)
ENST00000693365.1:n.5766A>C (POMGNT1)
ENST00000371984.8:c.1617A>C (POMGNT1) MANE Select	ENSP00000361052.3:p.Glu539Asp
ENST00000371984.7:c.1617A>C (POMGNT1)	ENSP00000361052.3:p.Glu539Asp
ENST00000371992.1:c.1617A>C (POMGNT1)	ENSP00000361060.1:p.Glu539Asp
ENST00000396420.7:c.*1286A>C (POMGNT1)	ENSP00000379698.3:n.*1286A>C
ENST00000480972.1:n.266A>C (POMGNT1)
ENST00000485714.1:n.2518A>C (POMGNT1)
NM_001243766.1:c.1617A>C (POMGNT1)	NP_001230695.1:p.Glu539Asp
NM_001290129.1:c.1551A>C (POMGNT1)	NP_001277058.1:p.Glu517Asp
NM_001290130.1:c.1188A>C (POMGNT1)	NP_001277059.1:p.Glu396Asp
NM_017739.3:c.1617A>C (POMGNT1)	NP_060209.3:p.Glu539Asp
XM_005271010.1:c.1617A>C (POMGNT1)	XP_005271067.1:p.Glu539Asp
XM_006710755.1:c.1617A>C (POMGNT1)	XP_006710818.1:p.Glu539Asp
XM_006710756.1:c.1617A>C (POMGNT1)	XP_006710819.1:p.Glu539Asp
XM_011540460.1:c.678+5197T>G (TSPAN1)	XP_011538762.1:n.678+5197T>G
XM_011540461.1:c.633+5197T>G (TSPAN1)	XP_011538763.1:n.633+5197T>G
XM_011541759.1:c.1551A>C (POMGNT1)	XP_011540061.1:p.Glu517Asp
XM_011541760.1:c.1551A>C (POMGNT1)	XP_011540062.1:p.Glu517Asp
XM_011541761.1:c.525A>C (POMGNT1)	XP_011540063.1:p.Glu175Asp
XM_011540460.3:c.678+5197T>G (TSPAN1)	XP_011538762.1:n.678+5197T>G
XM_011541760.3:c.1551A>C (POMGNT1)	XP_011540062.1:p.Glu517Asp
XM_017001690.1:c.1617A>C (POMGNT1)	XP_016857179.1:p.Glu539Asp
NM_001243766.2:c.1617A>C (POMGNT1)	NP_001230695.2:p.Glu539Asp
NM_001290129.2:c.1551A>C (POMGNT1)	NP_001277058.2:p.Glu517Asp
NM_001290130.2:c.1188A>C (POMGNT1)	NP_001277059.2:p.Glu396Asp
NM_017739.4:c.1617A>C (POMGNT1) MANE Select	NP_060209.4:p.Glu539Asp