Canonical Allele Identifier: CA340171768

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46656153C>A (hg19) ; chr1:g.46190481C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46190481C>A , CM000663.2:g.46190481C>A	GRCh38
NC_000001.10:g.46656153C>A , CM000663.1:g.46656153C>A	GRCh37
NC_000001.9:g.46428740C>A	NCBI36
NG_009205.2:g.34825G>T
NG_009205.3:g.34825G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1641G>T (POMGNT1)	ENSP00000379698.4:p.Arg547Ser
ENST00000477114.2:n.2203G>T (POMGNT1)
ENST00000497439.6:n.1813G>T (POMGNT1)
ENST00000684817.1:n.2001G>T (POMGNT1)
ENST00000684898.1:n.2203G>T (POMGNT1)
ENST00000685230.1:c.*951G>T (POMGNT1)	ENSP00000510305.1:n.*951G>T
ENST00000685275.1:n.2188G>T (POMGNT1)
ENST00000685444.1:c.1542G>T (POMGNT1)	ENSP00000510762.1:p.Arg514Ser
ENST00000685704.1:n.2307G>T (POMGNT1)
ENST00000685775.1:n.4683G>T (POMGNT1)
ENST00000685833.1:n.4034G>T (POMGNT1)
ENST00000686252.1:n.2715G>T (POMGNT1)
ENST00000686379.1:c.*765G>T (POMGNT1)	ENSP00000508913.1:n.*765G>T
ENST00000686724.1:n.3328G>T (POMGNT1)
ENST00000686737.1:c.1641G>T (POMGNT1)	ENSP00000508736.1:p.Arg547Ser
ENST00000687112.1:n.2507G>T (POMGNT1)
ENST00000687149.1:c.1680G>T (POMGNT1)	ENSP00000509745.1:p.Arg560Ser
ENST00000687197.1:c.*581G>T (POMGNT1)	ENSP00000510749.1:n.*581G>T
ENST00000687235.1:n.3718G>T (POMGNT1)
ENST00000687613.1:n.2290-492G>T (POMGNT1)
ENST00000687683.1:c.1641G>T (POMGNT1)	ENSP00000508522.1:p.Arg547Ser
ENST00000688032.1:n.2178G>T (POMGNT1)
ENST00000688596.1:n.2292G>T (POMGNT1)
ENST00000688608.1:c.1542G>T (POMGNT1)	ENSP00000508890.1:p.Arg514Ser
ENST00000688919.1:n.3039G>T (POMGNT1)
ENST00000689031.1:n.2102-492G>T (POMGNT1)
ENST00000689717.1:n.2015G>T (POMGNT1)
ENST00000689756.1:c.*1273G>T (POMGNT1)	ENSP00000509023.1:n.*1273G>T
ENST00000690377.1:n.1988G>T (POMGNT1)
ENST00000690678.1:c.1641G>T (POMGNT1)	ENSP00000508703.1:p.Arg547Ser
ENST00000691209.1:c.*581G>T (POMGNT1)	ENSP00000510112.1:n.*581G>T
ENST00000691243.1:c.*32G>T (POMGNT1)	ENSP00000510654.1:n.*32G>T
ENST00000692169.1:n.3305G>T (POMGNT1)
ENST00000692202.1:n.2216G>T (POMGNT1)
ENST00000692322.1:c.*1428G>T (POMGNT1)	ENSP00000509017.1:n.*1428G>T
ENST00000692369.1:c.1641G>T (POMGNT1)	ENSP00000508453.1:p.Arg547Ser
ENST00000692599.1:n.3516G>T (POMGNT1)
ENST00000692635.1:c.*516G>T (POMGNT1)	ENSP00000508425.1:n.*516G>T
ENST00000693168.1:n.3417G>T (POMGNT1)
ENST00000693218.1:c.*202G>T (POMGNT1)	ENSP00000510577.1:n.*202G>T
ENST00000693223.1:n.2589G>T (POMGNT1)
ENST00000693365.1:n.5790G>T (POMGNT1)
ENST00000371984.8:c.1641G>T (POMGNT1) MANE Select	ENSP00000361052.3:p.Arg547Ser
ENST00000371984.7:c.1641G>T (POMGNT1)	ENSP00000361052.3:p.Arg547Ser
ENST00000371992.1:c.1641G>T (POMGNT1)	ENSP00000361060.1:p.Arg547Ser
ENST00000396420.7:c.*1310G>T (POMGNT1)	ENSP00000379698.3:n.*1310G>T
ENST00000480972.1:n.290G>T (POMGNT1)
ENST00000485714.1:n.2542G>T (POMGNT1)
NM_001243766.1:c.1641G>T (POMGNT1)	NP_001230695.1:p.Arg547Ser
NM_001290129.1:c.1575G>T (POMGNT1)	NP_001277058.1:p.Arg525Ser
NM_001290130.1:c.1212G>T (POMGNT1)	NP_001277059.1:p.Arg404Ser
NM_017739.3:c.1641G>T (POMGNT1)	NP_060209.3:p.Arg547Ser
XM_005271010.1:c.1641G>T (POMGNT1)	XP_005271067.1:p.Arg547Ser
XM_006710755.1:c.1641G>T (POMGNT1)	XP_006710818.1:p.Arg547Ser
XM_006710756.1:c.1641G>T (POMGNT1)	XP_006710819.1:p.Arg547Ser
XM_011540460.1:c.678+5173C>A (TSPAN1)	XP_011538762.1:n.678+5173C>A
XM_011540461.1:c.633+5173C>A (TSPAN1)	XP_011538763.1:n.633+5173C>A
XM_011541759.1:c.1575G>T (POMGNT1)	XP_011540061.1:p.Arg525Ser
XM_011541760.1:c.1575G>T (POMGNT1)	XP_011540062.1:p.Arg525Ser
XM_011541761.1:c.549G>T (POMGNT1)	XP_011540063.1:p.Arg183Ser
XM_011540460.3:c.678+5173C>A (TSPAN1)	XP_011538762.1:n.678+5173C>A
XM_011541760.3:c.1575G>T (POMGNT1)	XP_011540062.1:p.Arg525Ser
XM_017001690.1:c.1641G>T (POMGNT1)	XP_016857179.1:p.Arg547Ser
NM_001243766.2:c.1641G>T (POMGNT1)	NP_001230695.2:p.Arg547Ser
NM_001290129.2:c.1575G>T (POMGNT1)	NP_001277058.2:p.Arg525Ser
NM_001290130.2:c.1212G>T (POMGNT1)	NP_001277059.2:p.Arg404Ser
NM_017739.4:c.1641G>T (POMGNT1) MANE Select	NP_060209.4:p.Arg547Ser