Canonical Allele Identifier: CA340171597

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46655642G>C (hg19) ; chr1:g.46189970G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46189970G>C , CM000663.2:g.46189970G>C	GRCh38
NC_000001.10:g.46655642G>C , CM000663.1:g.46655642G>C	GRCh37
NC_000001.9:g.46428229G>C	NCBI36
NG_009205.2:g.35336C>G
NG_009205.3:g.35336C>G

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1669C>G (POMGNT1)	ENSP00000379698.4:p.His557Asp
ENST00000497439.6:n.1841C>G (POMGNT1)
ENST00000684817.1:n.2029C>G (POMGNT1)
ENST00000684898.1:n.2231C>G (POMGNT1)
ENST00000685230.1:c.*979C>G (POMGNT1)	ENSP00000510305.1:n.*979C>G
ENST00000685275.1:n.2216C>G (POMGNT1)
ENST00000685444.1:c.1570C>G (POMGNT1)	ENSP00000510762.1:p.His524Asp
ENST00000685704.1:n.2335C>G (POMGNT1)
ENST00000685833.1:n.4062C>G (POMGNT1)
ENST00000686252.1:n.2743C>G (POMGNT1)
ENST00000686379.1:c.*793C>G (POMGNT1)	ENSP00000508913.1:n.*793C>G
ENST00000686724.1:n.3356C>G (POMGNT1)
ENST00000686737.1:c.1669C>G (POMGNT1)	ENSP00000508736.1:p.His557Asp
ENST00000687112.1:n.2535C>G (POMGNT1)
ENST00000687149.1:c.1708C>G (POMGNT1)	ENSP00000509745.1:p.His570Asp
ENST00000687197.1:c.*609C>G (POMGNT1)	ENSP00000510749.1:n.*609C>G
ENST00000687235.1:n.3746C>G (POMGNT1)
ENST00000687613.1:n.2309C>G (POMGNT1)
ENST00000687683.1:c.1669C>G (POMGNT1)	ENSP00000508522.1:p.His557Asp
ENST00000688032.1:n.2206C>G (POMGNT1)
ENST00000688596.1:n.2320C>G (POMGNT1)
ENST00000688608.1:c.1570C>G (POMGNT1)	ENSP00000508890.1:p.His524Asp
ENST00000689031.1:n.2121C>G (POMGNT1)
ENST00000689756.1:c.*1301C>G (POMGNT1)	ENSP00000509023.1:n.*1301C>G
ENST00000690377.1:n.2016C>G (POMGNT1)
ENST00000690678.1:c.1669C>G (POMGNT1)	ENSP00000508703.1:p.His557Asp
ENST00000691209.1:c.*609C>G (POMGNT1)	ENSP00000510112.1:n.*609C>G
ENST00000691243.1:c.*60C>G (POMGNT1)	ENSP00000510654.1:n.*60C>G
ENST00000692202.1:n.2244C>G (POMGNT1)
ENST00000692322.1:c.*1456C>G (POMGNT1)	ENSP00000509017.1:n.*1456C>G
ENST00000692369.1:c.1669C>G (POMGNT1)	ENSP00000508453.1:p.His557Asp
ENST00000692599.1:n.3544C>G (POMGNT1)
ENST00000692635.1:c.*544C>G (POMGNT1)	ENSP00000508425.1:n.*544C>G
ENST00000693168.1:n.3445C>G (POMGNT1)
ENST00000693218.1:c.*230C>G (POMGNT1)	ENSP00000510577.1:n.*230C>G
ENST00000693223.1:n.2617C>G (POMGNT1)
ENST00000371984.8:c.1669C>G (POMGNT1) MANE Select	ENSP00000361052.3:p.His557Asp
ENST00000371984.7:c.1669C>G (POMGNT1)	ENSP00000361052.3:p.His557Asp
ENST00000371992.1:c.1669C>G (POMGNT1)	ENSP00000361060.1:p.His557Asp
ENST00000396420.7:c.*1338C>G (POMGNT1)	ENSP00000379698.3:n.*1338C>G
ENST00000480972.1:n.318C>G (POMGNT1)
NM_001243766.1:c.1669C>G (POMGNT1)	NP_001230695.1:p.His557Asp
NM_001290129.1:c.1603C>G (POMGNT1)	NP_001277058.1:p.His535Asp
NM_001290130.1:c.1240C>G (POMGNT1)	NP_001277059.1:p.His414Asp
NM_017739.3:c.1669C>G (POMGNT1)	NP_060209.3:p.His557Asp
XM_005271010.1:c.1669C>G (POMGNT1)	XP_005271067.1:p.His557Asp
XM_006710755.1:c.1669C>G (POMGNT1)	XP_006710818.1:p.His557Asp
XM_006710756.1:c.1669C>G (POMGNT1)	XP_006710819.1:p.His557Asp
XM_011540460.1:c.678+4662G>C (TSPAN1)	XP_011538762.1:n.678+4662G>C
XM_011540461.1:c.633+4662G>C (TSPAN1)	XP_011538763.1:n.633+4662G>C
XM_011541759.1:c.1603C>G (POMGNT1)	XP_011540061.1:p.His535Asp
XM_011541760.1:c.1603C>G (POMGNT1)	XP_011540062.1:p.His535Asp
XM_011541761.1:c.577C>G (POMGNT1)	XP_011540063.1:p.His193Asp
XM_011540460.3:c.678+4662G>C (TSPAN1)	XP_011538762.1:n.678+4662G>C
XM_011541760.3:c.1603C>G (POMGNT1)	XP_011540062.1:p.His535Asp
XM_017001690.1:c.1669C>G (POMGNT1)	XP_016857179.1:p.His557Asp
NM_001243766.2:c.1669C>G (POMGNT1)	NP_001230695.2:p.His557Asp
NM_001290129.2:c.1603C>G (POMGNT1)	NP_001277058.2:p.His535Asp
NM_001290130.2:c.1240C>G (POMGNT1)	NP_001277059.2:p.His414Asp
NM_017739.4:c.1669C>G (POMGNT1) MANE Select	NP_060209.4:p.His557Asp