Canonical Allele Identifier: CA340171460

Gene: POMGNT1 TSPAN1

Linked Data

• MyVariant Identifiers: chr1:g.46655605T>G (hg19) ; chr1:g.46189933T>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.46189933T>G , CM000663.2:g.46189933T>G	GRCh38
NC_000001.10:g.46655605T>G , CM000663.1:g.46655605T>G	GRCh37
NC_000001.9:g.46428192T>G	NCBI36
NG_009205.2:g.35373A>C
NG_009205.3:g.35373A>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000396420.8:c.1706A>C (POMGNT1)	ENSP00000379698.4:p.Asp569Ala
ENST00000497439.6:n.1878A>C (POMGNT1)
ENST00000684817.1:n.2066A>C (POMGNT1)
ENST00000684898.1:n.2268A>C (POMGNT1)
ENST00000685230.1:c.*1016A>C (POMGNT1)	ENSP00000510305.1:n.*1016A>C
ENST00000685275.1:n.2253A>C (POMGNT1)
ENST00000685444.1:c.1607A>C (POMGNT1)	ENSP00000510762.1:p.Asp536Ala
ENST00000685704.1:n.2372A>C (POMGNT1)
ENST00000685833.1:n.4099A>C (POMGNT1)
ENST00000686252.1:n.2780A>C (POMGNT1)
ENST00000686379.1:c.*830A>C (POMGNT1)	ENSP00000508913.1:n.*830A>C
ENST00000686724.1:n.3393A>C (POMGNT1)
ENST00000686737.1:c.1706A>C (POMGNT1)	ENSP00000508736.1:p.Asp569Ala
ENST00000687112.1:n.2572A>C (POMGNT1)
ENST00000687149.1:c.1745A>C (POMGNT1)	ENSP00000509745.1:p.Asp582Ala
ENST00000687197.1:c.*646A>C (POMGNT1)	ENSP00000510749.1:n.*646A>C
ENST00000687235.1:n.3783A>C (POMGNT1)
ENST00000687613.1:n.2346A>C (POMGNT1)
ENST00000687683.1:c.1706A>C (POMGNT1)	ENSP00000508522.1:p.Asp569Ala
ENST00000688032.1:n.2243A>C (POMGNT1)
ENST00000688596.1:n.2357A>C (POMGNT1)
ENST00000688608.1:c.1607A>C (POMGNT1)	ENSP00000508890.1:p.Asp536Ala
ENST00000689031.1:n.2158A>C (POMGNT1)
ENST00000689756.1:c.*1338A>C (POMGNT1)	ENSP00000509023.1:n.*1338A>C
ENST00000690377.1:n.2053A>C (POMGNT1)
ENST00000690678.1:c.1706A>C (POMGNT1)	ENSP00000508703.1:p.Asp569Ala
ENST00000691209.1:c.*646A>C (POMGNT1)	ENSP00000510112.1:n.*646A>C
ENST00000691243.1:c.*97A>C (POMGNT1)	ENSP00000510654.1:n.*97A>C
ENST00000692202.1:n.2281A>C (POMGNT1)
ENST00000692322.1:c.*1493A>C (POMGNT1)	ENSP00000509017.1:n.*1493A>C
ENST00000692369.1:c.1706A>C (POMGNT1)	ENSP00000508453.1:p.Asp569Ala
ENST00000692599.1:n.3581A>C (POMGNT1)
ENST00000692635.1:c.*581A>C (POMGNT1)	ENSP00000508425.1:n.*581A>C
ENST00000693168.1:n.3482A>C (POMGNT1)
ENST00000693218.1:c.*267A>C (POMGNT1)	ENSP00000510577.1:n.*267A>C
ENST00000693223.1:n.2654A>C (POMGNT1)
ENST00000371984.8:c.1706A>C (POMGNT1) MANE Select	ENSP00000361052.3:p.Asp569Ala
ENST00000371984.7:c.1706A>C (POMGNT1)	ENSP00000361052.3:p.Asp569Ala
ENST00000371992.1:c.1706A>C (POMGNT1)	ENSP00000361060.1:p.Asp569Ala
ENST00000396420.7:c.*1375A>C (POMGNT1)	ENSP00000379698.3:n.*1375A>C
ENST00000480972.1:n.355A>C (POMGNT1)
NM_001243766.1:c.1706A>C (POMGNT1)	NP_001230695.1:p.Asp569Ala
NM_001290129.1:c.1640A>C (POMGNT1)	NP_001277058.1:p.Asp547Ala
NM_001290130.1:c.1277A>C (POMGNT1)	NP_001277059.1:p.Asp426Ala
NM_017739.3:c.1706A>C (POMGNT1)	NP_060209.3:p.Asp569Ala
XM_005271010.1:c.1706A>C (POMGNT1)	XP_005271067.1:p.Asp569Ala
XM_006710755.1:c.1706A>C (POMGNT1)	XP_006710818.1:p.Asp569Ala
XM_006710756.1:c.1706A>C (POMGNT1)	XP_006710819.1:p.Asp569Ala
XM_011540460.1:c.678+4625T>G (TSPAN1)	XP_011538762.1:n.678+4625T>G
XM_011540461.1:c.633+4625T>G (TSPAN1)	XP_011538763.1:n.633+4625T>G
XM_011541759.1:c.1640A>C (POMGNT1)	XP_011540061.1:p.Asp547Ala
XM_011541760.1:c.1640A>C (POMGNT1)	XP_011540062.1:p.Asp547Ala
XM_011541761.1:c.614A>C (POMGNT1)	XP_011540063.1:p.Asp205Ala
XM_011540460.3:c.678+4625T>G (TSPAN1)	XP_011538762.1:n.678+4625T>G
XM_011541760.3:c.1640A>C (POMGNT1)	XP_011540062.1:p.Asp547Ala
XM_017001690.1:c.1706A>C (POMGNT1)	XP_016857179.1:p.Asp569Ala
NM_001243766.2:c.1706A>C (POMGNT1)	NP_001230695.2:p.Asp569Ala
NM_001290129.2:c.1640A>C (POMGNT1)	NP_001277058.2:p.Asp547Ala
NM_001290130.2:c.1277A>C (POMGNT1)	NP_001277059.2:p.Asp426Ala
NM_017739.4:c.1706A>C (POMGNT1) MANE Select	NP_060209.4:p.Asp569Ala