Canonical Allele Identifier: CA303299
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 189916
ClinVar RCV Id: RCV000180868
dbSNP Id: rs794726756

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.166036412_166036416del , CM000664.2:g.166036412_166036416del GRCh38
NC_000002.11:g.166892922_166892926del , CM000664.1:g.166892922_166892926del GRCh37
NC_000002.10:g.166601168_166601172del NCBI36
NG_011906.1:g.42225_42229del , LRG_8:g.42225_42229del

Transcript Alleles

HGVS Amino-acid Change
ENST00000689288.1:c.*1098_*1102del ENSP00000509637.1:n.*1098_*1102del
ENST00000303395.9:c.3062_3066del ENSP00000303540.4:p.Lys1021SerfsTer10
ENST00000635750.1:c.3029_3033del ENSP00000490799.1:p.Lys1010SerfsTer10
ENST00000635776.1:c.3029_3033del ENSP00000490692.1:p.Lys1010SerfsTer10
ENST00000636194.1:c.*555_*559del ENSP00000490288.1:n.*555_*559del
ENST00000637968.1:n.3314_3318del
ENST00000637988.1:c.3029_3033del ENSP00000490780.1:p.Lys1010SerfsTer10
ENST00000640036.1:c.3029_3033del ENSP00000491573.1:p.Lys1010SerfsTer10
ENST00000641575.1:c.3026_3030del ENSP00000492917.1:p.Lys1009SerfsTer10
ENST00000641603.1:c.3062_3066del ENSP00000492945.1:p.Lys1021SerfsTer10
ENST00000641996.1:c.*2616_*2620del ENSP00000493054.1:n.*2616_*2620del
ENST00000671940.1:c.*1005_*1009del ENSP00000500336.1:n.*1005_*1009del
ENST00000673490.1:n.5535_5539del
ENST00000674923.1:c.3062_3066del MANE Select ENSP00000501589.1:p.Lys1021SerfsTer10
ENST00000303395.8:c.3062_3066del ENSP00000303540.4:p.Lys1021SerfsTer10
ENST00000375405.7:c.3029_3033del ENSP00000364554.3:p.Lys1010SerfsTer10
ENST00000409050.1:c.2978_2982del ENSP00000386312.1:p.Lys993SerfsTer10
ENST00000423058.6:c.3062_3066del ENSP00000407030.2:p.Lys1021SerfsTer10
NM_001165963.1:c.3062_3066del NP_001159435.1:p.Lys1021SerfsTer10
NM_001165964.1:c.2978_2982del NP_001159436.1:p.Lys993SerfsTer10
NM_001202435.1:c.3062_3066del NP_001189364.1:p.Lys1021SerfsTer10
NM_006920.4:c.3029_3033del , LRG_8t1:c.3029_3033del NP_008851.3:p.Lys1010SerfsTer10
XM_011511598.1:c.3062_3066del XP_011509900.1:p.Lys1021SerfsTer10
XM_011511599.1:c.3062_3066del XP_011509901.1:p.Lys1021SerfsTer10
XM_011511600.1:c.3062_3066del XP_011509902.1:p.Lys1021SerfsTer10
XM_011511601.1:c.3062_3066del XP_011509903.1:p.Lys1021SerfsTer10
XM_011511602.1:c.3062_3066del XP_011509904.1:p.Lys1021SerfsTer10
XM_011511603.1:c.3059_3063del XP_011509905.1:p.Lys1020SerfsTer10
XM_011511604.1:c.3029_3033del XP_011509906.1:p.Lys1010SerfsTer10
XM_011511605.1:c.3026_3030del XP_011509907.1:p.Lys1009SerfsTer10
XM_011511606.1:c.2978_2982del XP_011509908.1:p.Lys993SerfsTer10
XM_011511607.1:c.3062_3066del XP_011509909.1:p.Lys1021SerfsTer10
XR_922981.1:n.3246_3250del
NM_001165963.2:c.3062_3066del NP_001159435.1:p.Lys1021SerfsTer10
NM_001165964.2:c.2978_2982del NP_001159436.1:p.Lys993SerfsTer10
NM_001202435.2:c.3062_3066del NP_001189364.1:p.Lys1021SerfsTer10
NM_001353948.1:c.3062_3066del NP_001340877.1:p.Lys1021SerfsTer10
NM_001353949.1:c.3029_3033del NP_001340878.1:p.Lys1010SerfsTer10
NM_001353950.1:c.3029_3033del NP_001340879.1:p.Lys1010SerfsTer10
NM_001353951.1:c.3029_3033del NP_001340880.1:p.Lys1010SerfsTer10
NM_001353952.1:c.3029_3033del NP_001340881.1:p.Lys1010SerfsTer10
NM_001353954.1:c.3026_3030del NP_001340883.1:p.Lys1009SerfsTer10
NM_001353955.1:c.3026_3030del NP_001340884.1:p.Lys1009SerfsTer10
NM_001353957.1:c.2978_2982del NP_001340886.1:p.Lys993SerfsTer10
NM_001353958.1:c.2978_2982del NP_001340887.1:p.Lys993SerfsTer10
NM_001353960.1:c.2975_2979del NP_001340889.1:p.Lys992SerfsTer10
NM_001353961.1:c.620_624del NP_001340890.1:p.Lys207SerfsTer10
NM_006920.5:c.3029_3033del NP_008851.3:p.Lys1010SerfsTer10
NR_148667.1:n.3434_3438del
XR_001738883.1:n.3448_3452del
XR_001738884.1:n.3420_3424del
NM_001165963.3:c.3062_3066del NP_001159435.1:p.Lys1021SerfsTer10
NM_001165964.3:c.2978_2982del NP_001159436.1:p.Lys993SerfsTer10
NM_001202435.3:c.3062_3066del NP_001189364.1:p.Lys1021SerfsTer10
NM_001353948.2:c.3062_3066del NP_001340877.1:p.Lys1021SerfsTer10
NM_001353949.2:c.3029_3033del NP_001340878.1:p.Lys1010SerfsTer10
NM_001353950.2:c.3029_3033del NP_001340879.1:p.Lys1010SerfsTer10
NM_001353951.2:c.3029_3033del NP_001340880.1:p.Lys1010SerfsTer10
NM_001353952.2:c.3029_3033del NP_001340881.1:p.Lys1010SerfsTer10
NM_001353954.2:c.3026_3030del NP_001340883.1:p.Lys1009SerfsTer10
NM_001353955.2:c.3026_3030del NP_001340884.1:p.Lys1009SerfsTer10
NM_001353957.2:c.2978_2982del NP_001340886.1:p.Lys993SerfsTer10
NM_001353958.2:c.2978_2982del NP_001340887.1:p.Lys993SerfsTer10
NM_001353960.2:c.2975_2979del NP_001340889.1:p.Lys992SerfsTer10
NM_001353961.2:c.620_624del NP_001340890.1:p.Lys207SerfsTer10
NM_006920.6:c.3029_3033del NP_008851.3:p.Lys1010SerfsTer10
NR_148667.2:n.3415_3419del
NM_001165963.4:c.3062_3066del MANE Select NP_001159435.1:p.Lys1021SerfsTer10