ClinGen Allele Registry
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Canonical Allele Identifier:
CA295605
Gene: CLN5
HGNC
NCBI
Linked Data - Variant Effect Evidence
MyVariant.info:
GRCh38
chr13:g.76991953T>C
GRCh37
chr13:g.77566088T>C
Revel Score:
ENST00000377453 (MANE Select)
0.059
Linked Data - Sequence & Population
gnomAD v2:
13:77566088 T / C
gnomAD v3:
13:76991953 T / C
gnomAD v4:
chr13-76991953-T-C
Joint Max Group AF
0.0017371 (NFE)
Genomes Max Group AF
0.00111706 (NFE)
Exomes Max Group AF
0.00176285 (NFE)
Linked Data - NCBI & NCI
ClinVar RCV:
RCV000711260
RCV000778400
RCV000989146
RCV002316962
RCV003398802
ClinVar Variation:
166884
dbSNP:
201615354
JSON-LD
Genomic Alleles
HGVS
Genome Assembly
NC_000013.11:g.76991953T>C , CM000675.2:g.76991953T>C
GRCh38
NC_000013.10:g.77566088T>C , CM000675.1:g.77566088T>C
GRCh37
NC_000013.9:g.76464089T>C
NCBI36
NG_009064.1:g.5030T>C , LRG_692:g.5030T>C
Transcript Alleles
HGVS
Amino-acid Change
ENST00000636183.2:c.-146T>C
ENSP00000490181.2:n.-146T>C
ENST00000377453.7:c.2T>C
ENSP00000366673.3:p.Met1Thr
NM_006493.2:c.2T>C , LRG_692t1:c.2T>C
NP_006484.1:p.Met1Thr
XM_011534917.1:c.2T>C
XP_011533219.1:p.Met1Thr
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