Canonical Allele Identifier: CA28981081

Gene: PTPN22 AP4B1-AS1

Linked Data

• dbSNP Id: rs535210507
• gnomAD v3: 1-113863205-A-G
• gnomAD v4: 1-113863205-A-G
• MyVariant Identifiers: chr1:g.114405827A>G (hg19) ; chr1:g.113863205A>G (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113863205A>G , CM000663.2:g.113863205A>G	GRCh38
NC_000001.10:g.114405827A>G , CM000663.1:g.114405827A>G	GRCh37
NC_000001.9:g.114207350A>G	NCBI36
NG_011432.1:g.13549T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000359785.10:c.88-3745T>C (PTPN22) MANE Select	ENSP00000352833.5:n.88-3745T>C
ENST00000359785.9:c.88-3745T>C (PTPN22)	ENSP00000352833.5:n.88-3745T>C
ENST00000420377.6:c.88-3745T>C (PTPN22)	ENSP00000388229.2:n.88-3745T>C
ENST00000460620.5:c.88-3745T>C (PTPN22)	ENSP00000433141.1:n.88-3745T>C
ENST00000484147.5:n.129-3745T>C (PTPN22)
ENST00000525799.1:c.88-3745T>C (PTPN22)	ENSP00000432674.1:n.88-3745T>C
ENST00000528414.5:c.88-3745T>C (PTPN22)	ENSP00000435176.1:n.88-3745T>C
ENST00000529045.1:c.272+993T>C (PTPN22)	ENSP00000434932.1:n.272+993T>C
ENST00000532224.5:c.88-3745T>C (PTPN22)	ENSP00000431249.1:n.88-3745T>C
ENST00000534519.1:n.201-3745T>C (PTPN22)
ENST00000538253.5:c.88-3745T>C (PTPN22)	ENSP00000439372.2:n.88-3745T>C
NM_001193431.1:c.88-3745T>C (PTPN22)	NP_001180360.1:n.88-3745T>C
NM_001193431.2:c.88-3745T>C (PTPN22)	NP_001180360.1:n.88-3745T>C
NM_001308297.1:c.88-3745T>C (PTPN22)	NP_001295226.1:n.88-3745T>C
NM_012411.4:c.88-3745T>C (PTPN22)	NP_036543.4:n.88-3745T>C
NM_012411.5:c.88-3745T>C (PTPN22)	NP_036543.4:n.88-3745T>C
NM_015967.5:c.88-3745T>C (PTPN22)	NP_057051.3:n.88-3745T>C
NM_015967.6:c.88-3745T>C (PTPN22)	NP_057051.3:n.88-3745T>C
NR_037864.1:n.246+5189A>G (AP4B1-AS1)
NR_125965.1:n.415-34663A>G (AP4B1-AS1)
XM_011541221.1:c.88-3745T>C (PTPN22)	XP_011539523.1:n.88-3745T>C
XM_011541222.1:c.88-3745T>C (PTPN22)	XP_011539524.1:n.88-3745T>C
XM_011541223.1:c.88-3745T>C (PTPN22)	XP_011539525.1:n.88-3745T>C
XM_011541224.1:c.-564-3745T>C (PTPN22)	XP_011539526.1:n.-564-3745T>C
XM_011541225.1:c.88-3745T>C (PTPN22)	XP_011539527.1:n.88-3745T>C
XM_011541223.2:c.88-3745T>C (PTPN22)	XP_011539525.1:n.88-3745T>C
XM_011541225.2:c.88-3745T>C (PTPN22)	XP_011539527.1:n.88-3745T>C
XM_017001004.1:c.88-3745T>C (PTPN22)	XP_016856493.1:n.88-3745T>C
XM_017001005.2:c.-259+993T>C (PTPN22)	XP_016856494.1:n.-259+993T>C
XM_017001006.1:c.88-3745T>C (PTPN22)	XP_016856495.1:n.88-3745T>C
NM_015967.7:c.88-3745T>C (PTPN22)	NP_057051.3:n.88-3745T>C
NM_015967.8:c.88-3745T>C (PTPN22) MANE Select	NP_057051.4:n.88-3745T>C