Canonical Allele Identifier: CA279739

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 218064
• ClinVar RCV Id: RCV000202124 ; RCV001800526 ; RCV001853253 ; RCV002453733 ; RCV003454532 ; RCV003468930
• dbSNP Id: rs863225409
• MyVariant Identifiers: chr2:g.48032826_48032827del (hg19) ; chr2:g.47805687_47805688del (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47805687_47805688del , CM000664.2:g.47805687_47805688del	GRCh38
NC_000002.11:g.48032826_48032827del , CM000664.1:g.48032826_48032827del	GRCh37
NC_000002.10:g.47886330_47886331del	NCBI36
NG_007111.1:g.27541_27542del , LRG_219:g.27541_27542del
NG_008397.1:g.104988_104989del

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.3329_3330del (MSH6)	ENSP00000406248.2:p.Leu1110ArgfsTer5
ENST00000420813.6:c.3329_3330del (MSH6)	ENSP00000390382.2:p.Leu1110ArgfsTer5
ENST00000455383.6:c.3329_3330del (MSH6)	ENSP00000397484.2:p.Leu1110ArgfsTer5
ENST00000700004.2:c.3242_3243del (MSH6)	ENSP00000514752.2:p.Leu1081ArgfsTer5
ENST00000699999.1:n.4300_4301del (MSH6)
ENST00000700000.1:c.2060_2061del (MSH6)	ENSP00000514749.1:p.Leu687ArgfsTer5
ENST00000700002.1:c.3632_3633del (MSH6)	ENSP00000514750.1:p.Leu1211ArgfsTer5
ENST00000700003.1:c.1081_1082del (MSH6)	ENSP00000514751.1:n.1081_1082del
ENST00000700004.1:c.2399_2400del (MSH6)	ENSP00000514752.1:p.Leu800ArgfsTer5
ENST00000700005.1:n.2477_2478del (MSH6)
ENST00000700006.1:n.4288_4289del (MSH6)
ENST00000700007.1:n.2221_2222del (MSH6)
ENST00000700008.1:n.1795_1796del (MSH6)
ENST00000700009.1:n.1794_1795del (MSH6)
ENST00000700010.1:n.1035_1036del (MSH6)
ENST00000700011.1:n.2920_2921del (MSH6)
ENST00000234420.11:c.3626_3627del (MSH6) MANE Select	ENSP00000234420.5:p.Leu1209ArgfsTer5
ENST00000540021.6:c.3236_3237del (MSH6)	ENSP00000446475.1:p.Leu1079ArgfsTer5
ENST00000652107.1:c.3329_3330del (MSH6)	ENSP00000498629.1:p.Leu1110ArgfsTer5
ENST00000673637.1:c.3329_3330del (MSH6)	ENSP00000501310.1:p.Leu1110ArgfsTer5
ENST00000234420.9:c.3626_3627del (MSH6)	ENSP00000234420.4:p.Leu1209ArgfsTer5
ENST00000405808.5:c.169+2507_169+2508del (FBXO11)	ENSP00000385127.1:n.169+2507_169+2508del
ENST00000434234.5:c.*124+2306_*124+2307del (FBXO11)	ENSP00000402692.1:n.*124+2306_*124+2307del
ENST00000445503.5:c.*2973_*2974del (MSH6)	ENSP00000405294.1:n.*2973_*2974del
ENST00000538136.1:c.2720_2721del (MSH6)	ENSP00000438580.1:p.Leu907ArgfsTer5
ENST00000540021.5:c.3236_3237del (MSH6)	ENSP00000446475.1:p.Leu1079ArgfsTer5
ENST00000614496.4:c.2720_2721del (MSH6)	ENSP00000477844.1:p.Leu907ArgfsTer5
ENST00000622629.4:c.530_531del (MSH6)	ENSP00000482078.1:p.Leu177ArgfsTer5
NM_000179.2:c.3626_3627del , LRG_219t1:c.3626_3627del (MSH6)	NP_000170.1:p.Leu1209ArgfsTer5
NM_001281492.1:c.3236_3237del (MSH6)	NP_001268421.1:p.Leu1079ArgfsTer5
NM_001281493.1:c.2720_2721del (MSH6)	NP_001268422.1:p.Leu907ArgfsTer5
NM_001281494.1:c.2720_2721del (MSH6)	NP_001268423.1:p.Leu907ArgfsTer5
XM_005264271.1:c.3329_3330del (MSH6)	XP_005264328.1:p.Leu1110ArgfsTer5
XM_011532798.1:c.3443_3444del (MSH6)	XP_011531100.1:p.Leu1148ArgfsTer5
XM_011532799.1:c.3329_3330del (MSH6)	XP_011531101.1:p.Leu1110ArgfsTer5
XM_011532800.1:c.3329_3330del (MSH6)	XP_011531102.1:p.Leu1110ArgfsTer5
XM_024452819.1:c.3626_3627del (MSH6)	XP_024308587.1:p.Leu1209ArgfsTer5
XM_024452820.1:c.3443_3444del (MSH6)	XP_024308588.1:p.Leu1148ArgfsTer5
XM_024452821.1:c.3329_3330del (MSH6)	XP_024308589.1:p.Leu1110ArgfsTer5
XM_024452822.1:c.2720_2721del (MSH6)	XP_024308590.1:p.Leu907ArgfsTer5
NM_000179.3:c.3626_3627del (MSH6) MANE Select	NP_000170.1:p.Leu1209ArgfsTer5
NM_001281492.2:c.3236_3237del (MSH6)	NP_001268421.1:p.Leu1079ArgfsTer5
NM_001281493.2:c.2720_2721del (MSH6)	NP_001268422.1:p.Leu907ArgfsTer5
NM_001281494.2:c.2720_2721del (MSH6)	NP_001268423.1:p.Leu907ArgfsTer5