Canonical Allele Identifier: CA270079791

Gene: SPG11

Linked Data

• ClinVar Variation Id: 1372737
• ClinVar RCV Id: RCV001908094
• dbSNP Id: rs770861439
• gnomAD v2: 15-44876209-C-T
• gnomAD v4: 15-44584011-C-T
• MyVariant Identifiers: chr15:g.44876209C>T (hg19) ; chr15:g.44584011C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000015.10:g.44584011C>T , CM000677.2:g.44584011C>T	GRCh38
NC_000015.9:g.44876209C>T , CM000677.1:g.44876209C>T	GRCh37
NC_000015.8:g.42663501C>T	NCBI36
NG_008885.1:g.84668G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000559511.6:c.5669G>A	ENSP00000453246.2:p.Cys1890Tyr
ENST00000561391.2:n.1897G>A
ENST00000682065.1:c.5525G>A	ENSP00000507025.1:p.Cys1842Tyr
ENST00000682460.1:c.*1926G>A	ENSP00000508334.1:n.*1926G>A
ENST00000682495.1:c.*2161G>A	ENSP00000507166.1:n.*2161G>A
ENST00000682669.1:c.5468G>A	ENSP00000507782.1:p.Cys1823Tyr
ENST00000683186.1:c.*2432G>A	ENSP00000507268.1:n.*2432G>A
ENST00000683496.1:c.5669G>A	ENSP00000506968.1:p.Cys1890Tyr
ENST00000683734.1:c.5669G>A	ENSP00000508319.1:p.Cys1890Tyr
ENST00000683753.1:n.4715G>A
ENST00000684038.1:c.*2089G>A	ENSP00000507141.1:n.*2089G>A
ENST00000684235.1:c.5669G>A	ENSP00000508295.1:p.Cys1890Tyr
ENST00000684676.1:c.5516-76G>A	ENSP00000506948.1:n.5516-76G>A
ENST00000261866.12:c.5669G>A MANE Select	ENSP00000261866.7:p.Cys1890Tyr
ENST00000261866.11:c.5669G>A	ENSP00000261866.7:p.Cys1890Tyr
ENST00000427534.6:c.5669G>A	ENSP00000396110.2:p.Cys1890Tyr
ENST00000535302.6:c.5669G>A	ENSP00000445278.2:p.Cys1890Tyr
ENST00000558319.5:c.5669G>A	ENSP00000453599.1:p.Cys1890Tyr
ENST00000559511.5:c.517G>A
ENST00000559822.1:c.288-76G>A
NM_001160227.1:c.5669G>A	NP_001153699.1:p.Cys1890Tyr
NM_025137.3:c.5669G>A	NP_079413.3:p.Cys1890Tyr
XM_005254695.3:c.5411G>A	XP_005254752.1:p.Cys1804Tyr
XM_006720700.1:c.5525G>A	XP_006720763.1:p.Cys1842Tyr
XM_017022634.1:c.5669G>A	XP_016878123.1:p.Cys1890Tyr
XM_017022636.1:c.2546G>A	XP_016878125.1:p.Cys849Tyr
NM_025137.4:c.5669G>A MANE Select	NP_079413.3:p.Cys1890Tyr
NM_001160227.2:c.5669G>A	NP_001153699.1:p.Cys1890Tyr