Canonical Allele Identifier: CA2580615849
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1352889
dbSNP Id: rs2128726933

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987162_5987163del , CM000669.2:g.5987162_5987163del GRCh38
NC_000007.13:g.6026793_6026794del , CM000669.1:g.6026793_6026794del GRCh37
NC_000007.12:g.5993319_5993320del NCBI36
NG_008466.1:g.26947_26948del , LRG_161:g.26947_26948del

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1001_*1002del ENSP00000514615.2:n.*1001_*1002del
ENST00000699840.2:c.1602_1603del ENSP00000514638.2:p.Gln535GlyfsTer5
ENST00000699930.2:c.1497_1498del ENSP00000514695.2:p.Gln500GlyfsTer5
ENST00000406569.8:c.1605_1606del ENSP00000514464.1:p.Gln536GlyfsTer5
ENST00000644110.2:c.*1199_*1200del ENSP00000496392.2:n.*1199_*1200del
ENST00000699752.1:c.1449_1450del ENSP00000514561.1:p.Gln484GlyfsTer5
ENST00000699753.1:c.*1026_*1027del ENSP00000514562.1:n.*1026_*1027del
ENST00000699754.1:c.1407_1408del ENSP00000514563.1:p.Gln470GlyfsTer5
ENST00000699755.1:c.*1004_*1005del ENSP00000514564.1:n.*1004_*1005del
ENST00000699756.1:c.*1192_*1193del ENSP00000514565.1:n.*1192_*1193del
ENST00000699757.1:c.*862_*863del ENSP00000514566.1:n.*862_*863del
ENST00000699758.1:c.*862_*863del ENSP00000514567.1:n.*862_*863del
ENST00000699759.1:n.2459_2460del
ENST00000699760.1:c.1287_1288del ENSP00000514568.1:p.Gln430GlyfsTer5
ENST00000699761.1:c.1200_1201del ENSP00000514569.1:p.Gln401GlyfsTer5
ENST00000699762.1:c.1032_1033del ENSP00000514570.1:p.Gln345GlyfsTer5
ENST00000699763.1:c.*695_*696del ENSP00000514571.1:n.*695_*696del
ENST00000699764.1:c.1554-38_1554-37del ENSP00000514572.1:n.1554-38_1554-37del
ENST00000699765.1:c.*701_*702del ENSP00000514573.1:n.*701_*702del
ENST00000699766.1:c.1605_1606del ENSP00000514574.1:p.Gln536GlyfsTer5
ENST00000699767.1:c.1605_1606del ENSP00000514575.1:p.Gln536GlyfsTer5
ENST00000699768.1:c.1605_1606del ENSP00000514576.1:p.Gln536GlyfsTer5
ENST00000699811.1:c.1200_1201del ENSP00000514614.1:p.Gln401GlyfsTer5
ENST00000699813.1:n.1718_1719del
ENST00000699814.1:c.1228_1229del
ENST00000699815.1:c.*1136_*1137del ENSP00000514616.1:n.*1136_*1137del
ENST00000699816.1:c.*495_*496del ENSP00000514617.1:n.*495_*496del
ENST00000699817.1:c.*1199_*1200del ENSP00000514618.1:n.*1199_*1200del
ENST00000699818.1:c.1200_1201del ENSP00000514619.1:p.Gln401GlyfsTer5
ENST00000699819.1:c.*762_*763del ENSP00000514620.1:n.*762_*763del
ENST00000699820.1:c.1144+2640_1144+2641del ENSP00000514621.1:n.1144+2640_1144+2641del
ENST00000699821.1:c.1200_1201del ENSP00000514622.1:p.Gln401GlyfsTer5
ENST00000699822.1:c.*1057_*1058del ENSP00000514623.1:n.*1057_*1058del
ENST00000699823.1:c.1200_1201del ENSP00000514624.1:p.Gln401GlyfsTer5
ENST00000699824.1:c.*1108_*1109del ENSP00000514625.1:n.*1108_*1109del
ENST00000699825.1:c.1044_1045del ENSP00000514626.1:p.Gln349GlyfsTer5
ENST00000699826.1:c.*1004_*1005del ENSP00000514627.1:n.*1004_*1005del
ENST00000699827.1:c.1437_1438del ENSP00000514628.1:p.Gln480GlyfsTer5
ENST00000699828.1:c.*695_*696del ENSP00000514629.1:n.*695_*696del
ENST00000699833.1:n.3377_3378del
ENST00000699837.1:c.1200_1201del ENSP00000514635.1:p.Gln401GlyfsTer5
ENST00000699838.1:c.*1505_*1506del ENSP00000514636.1:n.*1505_*1506del
ENST00000699839.1:c.1791_1792del ENSP00000514637.1:p.Gln598GlyfsTer5
ENST00000699916.1:c.*862_*863del ENSP00000514684.1:n.*862_*863del
ENST00000699917.1:c.*1054_*1055del ENSP00000514685.1:n.*1054_*1055del
ENST00000699918.1:c.*1106_*1107del ENSP00000514686.1:n.*1106_*1107del
ENST00000699919.1:c.*1192_*1193del ENSP00000514687.1:n.*1192_*1193del
ENST00000699920.1:c.*1241_*1242del ENSP00000514688.1:n.*1241_*1242del
ENST00000699928.1:c.989-4169_989-4168del ENSP00000514693.1:n.989-4169_989-4168del
ENST00000699929.1:c.*906_*907del ENSP00000514694.1:n.*906_*907del
ENST00000699930.1:c.1497_1498del ENSP00000514695.1:p.Gln500GlyfsTer5
ENST00000699931.1:n.3033_3034del
ENST00000699951.1:c.*701_*702del ENSP00000514706.1:n.*701_*702del
ENST00000699952.1:c.803+10166_803+10167del ENSP00000514707.1:n.803+10166_803+10167del
ENST00000699953.1:c.*712_*713del ENSP00000514708.1:n.*712_*713del
ENST00000699954.1:c.*906_*907del ENSP00000514709.1:n.*906_*907del
ENST00000265849.12:c.1605_1606del MANE Select ENSP00000265849.7:p.Gln536GlyfsTer5
ENST00000642292.1:c.1200_1201del ENSP00000495524.1:p.Gln401GlyfsTer5
ENST00000642456.1:c.1200_1201del ENSP00000493814.1:p.Gln401GlyfsTer5
ENST00000643595.1:c.*1004_*1005del ENSP00000494497.1:n.*1004_*1005del
ENST00000644110.1:c.1287_1288del ENSP00000496392.1:p.Gln430GlyfsTer5
ENST00000265849.11:c.1605_1606del ENSP00000265849.7:p.Gln536GlyfsTer5
ENST00000382321.5:c.804-4169_804-4168del ENSP00000371758.4:n.804-4169_804-4168del
ENST00000406569.7:n.1605_1606del
ENST00000441476.6:c.1287_1288del ENSP00000392843.2:p.Gln430GlyfsTer5
ENST00000469652.1:n.63-4255_63-4254del
NM_000535.5:c.1605_1606del , LRG_161t1:c.1605_1606del NP_000526.1:p.Gln536GlyfsTer5
NR_003085.2:n.1687_1688del
XM_006715742.2:c.1599_1600del XP_006715805.1:p.Gln534GlyfsTer5
XM_006715744.2:c.672_673del XP_006715807.1:p.Gln225GlyfsTer5
XM_011515427.1:c.1650_1651del XP_011513729.1:p.Gln551GlyfsTer5
XM_011515428.1:c.1494_1495del XP_011513730.1:p.Gln499GlyfsTer5
XM_011515429.1:c.1287_1288del XP_011513731.1:p.Gln430GlyfsTer5
XM_011515430.1:c.1287_1288del XP_011513732.1:p.Gln430GlyfsTer5
NM_000535.6:c.1605_1606del NP_000526.2:p.Gln536GlyfsTer5
NM_001322003.1:c.1200_1201del NP_001308932.1:p.Gln401GlyfsTer5
NM_001322004.1:c.1200_1201del NP_001308933.1:p.Gln401GlyfsTer5
NM_001322005.1:c.1200_1201del NP_001308934.1:p.Gln401GlyfsTer5
NM_001322006.1:c.1449_1450del NP_001308935.1:p.Gln484GlyfsTer5
NM_001322007.1:c.1287_1288del NP_001308936.1:p.Gln430GlyfsTer5
NM_001322008.1:c.1287_1288del NP_001308937.1:p.Gln430GlyfsTer5
NM_001322009.1:c.1200_1201del NP_001308938.1:p.Gln401GlyfsTer5
NM_001322010.1:c.1044_1045del NP_001308939.1:p.Gln349GlyfsTer5
NM_001322011.1:c.672_673del NP_001308940.1:p.Gln225GlyfsTer5
NM_001322012.1:c.672_673del NP_001308941.1:p.Gln225GlyfsTer5
NM_001322013.1:c.1032_1033del NP_001308942.1:p.Gln345GlyfsTer5
NM_001322014.1:c.1605_1606del NP_001308943.1:p.Gln536GlyfsTer5
NM_001322015.1:c.1296_1297del NP_001308944.1:p.Gln433GlyfsTer5
NR_136154.1:n.1692_1693del
XM_006715744.4:c.672_673del XP_006715807.1:p.Gln225GlyfsTer5
XM_017012342.2:c.672_673del XP_016867831.1:p.Gln225GlyfsTer5
XM_024446800.1:c.1044_1045del XP_024302568.1:p.Gln349GlyfsTer5
NM_000535.7:c.1605_1606del MANE Select NP_000526.2:p.Gln536GlyfsTer5
NM_001322003.2:c.1200_1201del NP_001308932.1:p.Gln401GlyfsTer5
NM_001322004.2:c.1200_1201del NP_001308933.1:p.Gln401GlyfsTer5
NM_001322005.2:c.1200_1201del NP_001308934.1:p.Gln401GlyfsTer5
NM_001322006.2:c.1449_1450del NP_001308935.1:p.Gln484GlyfsTer5
NM_001322008.2:c.1287_1288del NP_001308937.1:p.Gln430GlyfsTer5
NM_001322009.2:c.1200_1201del NP_001308938.1:p.Gln401GlyfsTer5
NM_001322010.2:c.1044_1045del NP_001308939.1:p.Gln349GlyfsTer5
NM_001322011.2:c.672_673del NP_001308940.1:p.Gln225GlyfsTer5
NM_001322012.2:c.672_673del NP_001308941.1:p.Gln225GlyfsTer5
NM_001322013.2:c.1032_1033del NP_001308942.1:p.Gln345GlyfsTer5
NM_001322014.2:c.1605_1606del NP_001308943.1:p.Gln536GlyfsTer5
NM_001322015.2:c.1296_1297del NP_001308944.1:p.Gln433GlyfsTer5
NM_001322007.2:c.1287_1288del NP_001308936.1:p.Gln430GlyfsTer5