Canonical Allele Identifier: CA2580614388
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 1708223

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.166012153_166012154del , CM000664.2:g.166012153_166012154del GRCh38
NC_000002.11:g.166868663_166868664del , CM000664.1:g.166868663_166868664del GRCh37
NC_000002.10:g.166576909_166576910del NCBI36
NG_011906.1:g.66488_66489del , LRG_8:g.66488_66489del

Transcript Alleles

HGVS Amino-acid Change
ENST00000689288.1:c.*1872_*1873del ENSP00000509637.1:n.*1872_*1873del
ENST00000303395.9:c.3836_3837del ENSP00000303540.4:p.Tyr1279PhefsTer14
ENST00000635750.1:c.3803_3804del ENSP00000490799.1:p.Tyr1268PhefsTer14
ENST00000635776.1:c.3803_3804del ENSP00000490692.1:p.Tyr1268PhefsTer14
ENST00000636194.1:c.*1329_*1330del ENSP00000490288.1:n.*1329_*1330del
ENST00000637038.1:c.634_635del
ENST00000637968.1:n.4088_4089del
ENST00000637988.1:c.3803_3804del ENSP00000490780.1:p.Tyr1268PhefsTer14
ENST00000640036.1:c.3803_3804del ENSP00000491573.1:p.Tyr1268PhefsTer14
ENST00000641575.1:c.3800_3801del ENSP00000492917.1:p.Tyr1267PhefsTer14
ENST00000641603.1:c.3836_3837del ENSP00000492945.1:p.Tyr1279PhefsTer14
ENST00000641996.1:c.*3390_*3391del ENSP00000493054.1:n.*3390_*3391del
ENST00000671940.1:c.*1779_*1780del ENSP00000500336.1:n.*1779_*1780del
ENST00000673490.1:n.6309_6310del
ENST00000674923.1:c.3836_3837del MANE Select ENSP00000501589.1:p.Tyr1279PhefsTer14
ENST00000303395.8:c.3836_3837del ENSP00000303540.4:p.Tyr1279PhefsTer14
ENST00000375405.7:c.3803_3804del ENSP00000364554.3:p.Tyr1268PhefsTer14
ENST00000409050.1:c.3752_3753del ENSP00000386312.1:p.Tyr1251PhefsTer14
ENST00000423058.6:c.3836_3837del ENSP00000407030.2:p.Tyr1279PhefsTer14
NM_001165963.1:c.3836_3837del NP_001159435.1:p.Tyr1279PhefsTer14
NM_001165964.1:c.3752_3753del NP_001159436.1:p.Tyr1251PhefsTer14
NM_001202435.1:c.3836_3837del NP_001189364.1:p.Tyr1279PhefsTer14
NM_006920.4:c.3803_3804del , LRG_8t1:c.3803_3804del NP_008851.3:p.Tyr1268PhefsTer14
NR_110598.1:n.176-3460_176-3459del
XM_011511598.1:c.3836_3837del XP_011509900.1:p.Tyr1279PhefsTer14
XM_011511599.1:c.3836_3837del XP_011509901.1:p.Tyr1279PhefsTer14
XM_011511600.1:c.3836_3837del XP_011509902.1:p.Tyr1279PhefsTer14
XM_011511601.1:c.3836_3837del XP_011509903.1:p.Tyr1279PhefsTer14
XM_011511602.1:c.3836_3837del XP_011509904.1:p.Tyr1279PhefsTer14
XM_011511603.1:c.3833_3834del XP_011509905.1:p.Tyr1278PhefsTer14
XM_011511604.1:c.3803_3804del XP_011509906.1:p.Tyr1268PhefsTer14
XM_011511605.1:c.3800_3801del XP_011509907.1:p.Tyr1267PhefsTer14
XM_011511606.1:c.3752_3753del XP_011509908.1:p.Tyr1251PhefsTer14
XM_011511607.1:c.3836_3837del XP_011509909.1:p.Tyr1279PhefsTer14
XR_922981.1:n.4020_4021del
NM_001165963.2:c.3836_3837del NP_001159435.1:p.Tyr1279PhefsTer14
NM_001165964.2:c.3752_3753del NP_001159436.1:p.Tyr1251PhefsTer14
NM_001202435.2:c.3836_3837del NP_001189364.1:p.Tyr1279PhefsTer14
NM_001353948.1:c.3836_3837del NP_001340877.1:p.Tyr1279PhefsTer14
NM_001353949.1:c.3803_3804del NP_001340878.1:p.Tyr1268PhefsTer14
NM_001353950.1:c.3803_3804del NP_001340879.1:p.Tyr1268PhefsTer14
NM_001353951.1:c.3803_3804del NP_001340880.1:p.Tyr1268PhefsTer14
NM_001353952.1:c.3803_3804del NP_001340881.1:p.Tyr1268PhefsTer14
NM_001353954.1:c.3800_3801del NP_001340883.1:p.Tyr1267PhefsTer14
NM_001353955.1:c.3800_3801del NP_001340884.1:p.Tyr1267PhefsTer14
NM_001353957.1:c.3752_3753del NP_001340886.1:p.Tyr1251PhefsTer14
NM_001353958.1:c.3752_3753del NP_001340887.1:p.Tyr1251PhefsTer14
NM_001353960.1:c.3749_3750del NP_001340889.1:p.Tyr1250PhefsTer14
NM_001353961.1:c.1394_1395del NP_001340890.1:p.Tyr465PhefsTer14
NM_006920.5:c.3803_3804del NP_008851.3:p.Tyr1268PhefsTer14
NR_148667.1:n.4208_4209del
XR_001738883.1:n.4222_4223del
XR_001738884.1:n.4194_4195del
NM_001165963.3:c.3836_3837del NP_001159435.1:p.Tyr1279PhefsTer14
NM_001165964.3:c.3752_3753del NP_001159436.1:p.Tyr1251PhefsTer14
NM_001202435.3:c.3836_3837del NP_001189364.1:p.Tyr1279PhefsTer14
NM_001353948.2:c.3836_3837del NP_001340877.1:p.Tyr1279PhefsTer14
NM_001353949.2:c.3803_3804del NP_001340878.1:p.Tyr1268PhefsTer14
NM_001353950.2:c.3803_3804del NP_001340879.1:p.Tyr1268PhefsTer14
NM_001353951.2:c.3803_3804del NP_001340880.1:p.Tyr1268PhefsTer14
NM_001353952.2:c.3803_3804del NP_001340881.1:p.Tyr1268PhefsTer14
NM_001353954.2:c.3800_3801del NP_001340883.1:p.Tyr1267PhefsTer14
NM_001353955.2:c.3800_3801del NP_001340884.1:p.Tyr1267PhefsTer14
NM_001353957.2:c.3752_3753del NP_001340886.1:p.Tyr1251PhefsTer14
NM_001353958.2:c.3752_3753del NP_001340887.1:p.Tyr1251PhefsTer14
NM_001353960.2:c.3749_3750del NP_001340889.1:p.Tyr1250PhefsTer14
NM_001353961.2:c.1394_1395del NP_001340890.1:p.Tyr465PhefsTer14
NM_006920.6:c.3803_3804del NP_008851.3:p.Tyr1268PhefsTer14
NR_148667.2:n.4189_4190del
NM_001165963.4:c.3836_3837del MANE Select NP_001159435.1:p.Tyr1279PhefsTer14