Canonical Allele Identifier: CA2580076840
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1784648
ClinVar RCV Id: RCV002419677

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5982971_5982972del , CM000669.2:g.5982971_5982972del GRCh38
NC_000007.13:g.6022602_6022603del , CM000669.1:g.6022602_6022603del GRCh37
NC_000007.12:g.5989128_5989129del NCBI36
NG_008466.1:g.31135_31136del , LRG_161:g.31135_31136del

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1422_*1423del ENSP00000514615.2:n.*1422_*1423del
ENST00000699840.2:c.2023_2024del ENSP00000514638.2:p.Met675GlyfsTer7
ENST00000699930.2:c.1918_1919del ENSP00000514695.2:p.Met640GlyfsTer7
ENST00000406569.8:c.1678+4115_1678+4116del ENSP00000514464.1:n.1678+4115_1678+4116del
ENST00000644110.2:c.*1620_*1621del ENSP00000496392.2:n.*1620_*1621del
ENST00000699752.1:c.1870_1871del ENSP00000514561.1:p.Met624GlyfsTer7
ENST00000699753.1:c.*1447_*1448del ENSP00000514562.1:n.*1447_*1448del
ENST00000699754.1:c.1828_1829del ENSP00000514563.1:p.Met610GlyfsTer7
ENST00000699755.1:c.*1425_*1426del ENSP00000514564.1:n.*1425_*1426del
ENST00000699756.1:c.*1613_*1614del ENSP00000514565.1:n.*1613_*1614del
ENST00000699757.1:c.*1283_*1284del ENSP00000514566.1:n.*1283_*1284del
ENST00000699758.1:c.*1283_*1284del ENSP00000514567.1:n.*1283_*1284del
ENST00000699759.1:n.2880_2881del
ENST00000699760.1:c.1708_1709del ENSP00000514568.1:p.Met570GlyfsTer7
ENST00000699761.1:c.1621_1622del ENSP00000514569.1:p.Met541GlyfsTer7
ENST00000699762.1:c.1453_1454del ENSP00000514570.1:p.Met485GlyfsTer7
ENST00000699763.1:c.*1116_*1117del ENSP00000514571.1:n.*1116_*1117del
ENST00000699764.1:c.*344_*345del ENSP00000514572.1:n.*344_*345del
ENST00000699765.1:c.*1122_*1123del ENSP00000514573.1:n.*1122_*1123del
ENST00000699766.1:c.2026_2027del ENSP00000514574.1:p.Met676GlyfsTer7
ENST00000699767.1:c.2026_2027del ENSP00000514575.1:p.Met676GlyfsTer7
ENST00000699768.1:c.2026_2027del ENSP00000514576.1:p.Met676GlyfsTer7
ENST00000699811.1:c.1621_1622del ENSP00000514614.1:p.Met541GlyfsTer7
ENST00000699813.1:n.2139_2140del
ENST00000699814.1:c.1649_1650del
ENST00000699815.1:c.*1557_*1558del ENSP00000514616.1:n.*1557_*1558del
ENST00000699816.1:c.*916_*917del ENSP00000514617.1:n.*916_*917del
ENST00000699817.1:c.*1620_*1621del ENSP00000514618.1:n.*1620_*1621del
ENST00000699818.1:c.1621_1622del ENSP00000514619.1:p.Met541GlyfsTer7
ENST00000699819.1:c.*1183_*1184del ENSP00000514620.1:n.*1183_*1184del
ENST00000699820.1:c.1164_1165del ENSP00000514621.1:p.Trp389GlufsTer?
ENST00000699821.1:c.1621_1622del ENSP00000514622.1:p.Met541GlyfsTer7
ENST00000699822.1:c.*1478_*1479del ENSP00000514623.1:n.*1478_*1479del
ENST00000699823.1:c.1621_1622del ENSP00000514624.1:p.Met541GlyfsTer7
ENST00000699824.1:c.*1529_*1530del ENSP00000514625.1:n.*1529_*1530del
ENST00000699825.1:c.1465_1466del ENSP00000514626.1:p.Met489GlyfsTer7
ENST00000699826.1:c.*1425_*1426del ENSP00000514627.1:n.*1425_*1426del
ENST00000699827.1:c.1858_1859del ENSP00000514628.1:p.Met620GlyfsTer7
ENST00000699828.1:c.*1116_*1117del ENSP00000514629.1:n.*1116_*1117del
ENST00000699833.1:n.3798_3799del
ENST00000699837.1:c.1621_1622del ENSP00000514635.1:p.Met541GlyfsTer7
ENST00000699838.1:c.*1926_*1927del ENSP00000514636.1:n.*1926_*1927del
ENST00000699839.1:c.2212_2213del ENSP00000514637.1:p.Met738GlyfsTer7
ENST00000699916.1:c.*1283_*1284del ENSP00000514684.1:n.*1283_*1284del
ENST00000699917.1:c.*1475_*1476del ENSP00000514685.1:n.*1475_*1476del
ENST00000699918.1:c.*1527_*1528del ENSP00000514686.1:n.*1527_*1528del
ENST00000699919.1:c.*1613_*1614del ENSP00000514687.1:n.*1613_*1614del
ENST00000699920.1:c.*1662_*1663del ENSP00000514688.1:n.*1662_*1663del
ENST00000699928.1:c.1008_1009del ENSP00000514693.1:p.Trp337GlufsTer?
ENST00000699951.1:c.*1122_*1123del ENSP00000514706.1:n.*1122_*1123del
ENST00000699952.1:c.804-9430_804-9429del ENSP00000514707.1:n.804-9430_804-9429del
ENST00000265849.12:c.2026_2027del MANE Select ENSP00000265849.7:p.Met676GlyfsTer7
ENST00000642292.1:c.1621_1622del ENSP00000495524.1:p.Met541GlyfsTer7
ENST00000642456.1:c.1621_1622del ENSP00000493814.1:p.Met541GlyfsTer7
ENST00000643595.1:c.*1425_*1426del ENSP00000494497.1:n.*1425_*1426del
ENST00000644110.1:c.1708_1709del ENSP00000496392.1:p.Met570GlyfsTer7
ENST00000265849.11:c.2026_2027del ENSP00000265849.7:p.Met676GlyfsTer7
ENST00000382321.5:c.823_824del ENSP00000371758.4:p.Met275GlyfsTer7
ENST00000406569.7:n.1678+4115_1678+4116del
ENST00000441476.6:c.1708_1709del ENSP00000392843.2:p.Met570GlyfsTer7
ENST00000469652.1:n.63-67_63-66del
NM_000535.5:c.2026_2027del , LRG_161t1:c.2026_2027del NP_000526.1:p.Met676GlyfsTer7
NR_003085.2:n.2108_2109del
XM_006715742.2:c.2020_2021del XP_006715805.1:p.Met674GlyfsTer7
XM_006715744.2:c.1093_1094del XP_006715807.1:p.Met365GlyfsTer7
XM_011515427.1:c.2071_2072del XP_011513729.1:p.Met691GlyfsTer7
XM_011515428.1:c.1915_1916del XP_011513730.1:p.Met639GlyfsTer7
XM_011515429.1:c.1708_1709del XP_011513731.1:p.Met570GlyfsTer7
XM_011515430.1:c.1708_1709del XP_011513732.1:p.Met570GlyfsTer7
NM_000535.6:c.2026_2027del NP_000526.2:p.Met676GlyfsTer7
NM_001322003.1:c.1621_1622del NP_001308932.1:p.Met541GlyfsTer7
NM_001322004.1:c.1621_1622del NP_001308933.1:p.Met541GlyfsTer7
NM_001322005.1:c.1621_1622del NP_001308934.1:p.Met541GlyfsTer7
NM_001322006.1:c.1870_1871del NP_001308935.1:p.Met624GlyfsTer7
NM_001322007.1:c.1708_1709del NP_001308936.1:p.Met570GlyfsTer7
NM_001322008.1:c.1708_1709del NP_001308937.1:p.Met570GlyfsTer7
NM_001322009.1:c.1621_1622del NP_001308938.1:p.Met541GlyfsTer7
NM_001322010.1:c.1465_1466del NP_001308939.1:p.Met489GlyfsTer7
NM_001322011.1:c.1093_1094del NP_001308940.1:p.Met365GlyfsTer7
NM_001322012.1:c.1093_1094del NP_001308941.1:p.Met365GlyfsTer7
NM_001322013.1:c.1453_1454del NP_001308942.1:p.Met485GlyfsTer7
NM_001322014.1:c.2026_2027del NP_001308943.1:p.Met676GlyfsTer7
NM_001322015.1:c.1717_1718del NP_001308944.1:p.Met573GlyfsTer7
NR_136154.1:n.2113_2114del
XM_006715744.4:c.1093_1094del XP_006715807.1:p.Met365GlyfsTer7
XM_017012342.2:c.1093_1094del XP_016867831.1:p.Met365GlyfsTer7
XM_024446800.1:c.1465_1466del XP_024302568.1:p.Met489GlyfsTer7
NM_000535.7:c.2026_2027del MANE Select NP_000526.2:p.Met676GlyfsTer7
NM_001322003.2:c.1621_1622del NP_001308932.1:p.Met541GlyfsTer7
NM_001322004.2:c.1621_1622del NP_001308933.1:p.Met541GlyfsTer7
NM_001322005.2:c.1621_1622del NP_001308934.1:p.Met541GlyfsTer7
NM_001322006.2:c.1870_1871del NP_001308935.1:p.Met624GlyfsTer7
NM_001322008.2:c.1708_1709del NP_001308937.1:p.Met570GlyfsTer7
NM_001322009.2:c.1621_1622del NP_001308938.1:p.Met541GlyfsTer7
NM_001322010.2:c.1465_1466del NP_001308939.1:p.Met489GlyfsTer7
NM_001322011.2:c.1093_1094del NP_001308940.1:p.Met365GlyfsTer7
NM_001322012.2:c.1093_1094del NP_001308941.1:p.Met365GlyfsTer7
NM_001322013.2:c.1453_1454del NP_001308942.1:p.Met485GlyfsTer7
NM_001322014.2:c.2026_2027del NP_001308943.1:p.Met676GlyfsTer7
NM_001322015.2:c.1717_1718del NP_001308944.1:p.Met573GlyfsTer7
NM_001322007.2:c.1708_1709del NP_001308936.1:p.Met570GlyfsTer7