Canonical Allele Identifier: CA2580076757
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 1786466
ClinVar RCV Id: RCV002417843

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5982863del , CM000669.2:g.5982863del GRCh38
NC_000007.13:g.6022494del , CM000669.1:g.6022494del GRCh37
NC_000007.12:g.5989020del NCBI36
NG_008466.1:g.31244del , LRG_161:g.31244del

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1531del ENSP00000514615.2:n.*1531del
ENST00000699840.2:c.2132del ENSP00000514638.2:p.Leu711ArgfsTer13
ENST00000699930.2:c.2027del ENSP00000514695.2:p.Leu676ArgfsTer13
ENST00000406569.8:c.1678+4224del ENSP00000514464.1:n.1678+4224del
ENST00000644110.2:c.*1729del ENSP00000496392.2:n.*1729del
ENST00000699752.1:c.1979del ENSP00000514561.1:p.Leu660ArgfsTer13
ENST00000699753.1:c.*1556del ENSP00000514562.1:n.*1556del
ENST00000699754.1:c.1937del ENSP00000514563.1:p.Leu646ArgfsTer13
ENST00000699755.1:c.*1534del ENSP00000514564.1:n.*1534del
ENST00000699756.1:c.*1722del ENSP00000514565.1:n.*1722del
ENST00000699757.1:c.*1392del ENSP00000514566.1:n.*1392del
ENST00000699758.1:c.*1392del ENSP00000514567.1:n.*1392del
ENST00000699759.1:n.2989del
ENST00000699760.1:c.1817del ENSP00000514568.1:p.Leu606ArgfsTer13
ENST00000699761.1:c.1730del ENSP00000514569.1:p.Leu577ArgfsTer13
ENST00000699762.1:c.1562del ENSP00000514570.1:p.Leu521ArgfsTer13
ENST00000699763.1:c.*1225del ENSP00000514571.1:n.*1225del
ENST00000699764.1:c.*453del ENSP00000514572.1:n.*453del
ENST00000699765.1:c.*1231del ENSP00000514573.1:n.*1231del
ENST00000699766.1:c.2135del ENSP00000514574.1:p.Leu712ArgfsTer13
ENST00000699767.1:c.2135del ENSP00000514575.1:p.Leu712ArgfsTer13
ENST00000699768.1:c.2135del ENSP00000514576.1:p.Leu712ArgfsTer13
ENST00000699811.1:c.1730del ENSP00000514614.1:p.Leu577ArgfsTer13
ENST00000699813.1:n.2248del
ENST00000699814.1:c.1758del
ENST00000699815.1:c.*1666del ENSP00000514616.1:n.*1666del
ENST00000699816.1:c.*1025del ENSP00000514617.1:n.*1025del
ENST00000699817.1:c.*1729del ENSP00000514618.1:n.*1729del
ENST00000699818.1:c.1730del ENSP00000514619.1:p.Leu577ArgfsTer13
ENST00000699819.1:c.*1292del ENSP00000514620.1:n.*1292del
ENST00000699820.1:c.*73del ENSP00000514621.1:n.*73del
ENST00000699821.1:c.1730del ENSP00000514622.1:p.Leu577ArgfsTer13
ENST00000699822.1:c.*1587del ENSP00000514623.1:n.*1587del
ENST00000699823.1:c.1730del ENSP00000514624.1:p.Leu577ArgfsTer13
ENST00000699824.1:c.*1638del ENSP00000514625.1:n.*1638del
ENST00000699825.1:c.1574del ENSP00000514626.1:p.Leu525ArgfsTer13
ENST00000699826.1:c.*1534del ENSP00000514627.1:n.*1534del
ENST00000699827.1:c.1967del ENSP00000514628.1:p.Leu656ArgfsTer13
ENST00000699828.1:c.*1225del ENSP00000514629.1:n.*1225del
ENST00000699833.1:n.3907del
ENST00000699837.1:c.1730del ENSP00000514635.1:p.Leu577ArgfsTer13
ENST00000699838.1:c.*2035del ENSP00000514636.1:n.*2035del
ENST00000699839.1:c.2321del ENSP00000514637.1:p.Leu774ArgfsTer13
ENST00000699916.1:c.*1392del ENSP00000514684.1:n.*1392del
ENST00000699917.1:c.*1584del ENSP00000514685.1:n.*1584del
ENST00000699918.1:c.*1636del ENSP00000514686.1:n.*1636del
ENST00000699919.1:c.*1722del ENSP00000514687.1:n.*1722del
ENST00000699920.1:c.*1771del ENSP00000514688.1:n.*1771del
ENST00000699928.1:c.*73del ENSP00000514693.1:n.*73del
ENST00000699951.1:c.*1231del ENSP00000514706.1:n.*1231del
ENST00000699952.1:c.804-9321del ENSP00000514707.1:n.804-9321del
ENST00000265849.12:c.2135del MANE Select ENSP00000265849.7:p.Leu712ArgfsTer13
ENST00000642292.1:c.1730del ENSP00000495524.1:p.Leu577ArgfsTer13
ENST00000642456.1:c.1730del ENSP00000493814.1:p.Leu577ArgfsTer13
ENST00000643595.1:c.*1534del ENSP00000494497.1:n.*1534del
ENST00000644110.1:c.1817del ENSP00000496392.1:p.Leu606ArgfsTer13
ENST00000265849.11:c.2135del ENSP00000265849.7:p.Leu712ArgfsTer13
ENST00000382321.5:c.932del ENSP00000371758.4:p.Leu311ArgfsTer13
ENST00000406569.7:n.1678+4224del
ENST00000441476.6:c.1817del ENSP00000392843.2:p.Leu606ArgfsTer13
NM_000535.5:c.2135del , LRG_161t1:c.2135del NP_000526.1:p.Leu712ArgfsTer13
NR_003085.2:n.2217del
XM_006715742.2:c.2129del XP_006715805.1:p.Leu710ArgfsTer13
XM_006715744.2:c.1202del XP_006715807.1:p.Leu401ArgfsTer13
XM_011515427.1:c.2180del XP_011513729.1:p.Leu727ArgfsTer13
XM_011515428.1:c.2024del XP_011513730.1:p.Leu675ArgfsTer13
XM_011515429.1:c.1817del XP_011513731.1:p.Leu606ArgfsTer13
XM_011515430.1:c.1817del XP_011513732.1:p.Leu606ArgfsTer13
NM_000535.6:c.2135del NP_000526.2:p.Leu712ArgfsTer13
NM_001322003.1:c.1730del NP_001308932.1:p.Leu577ArgfsTer13
NM_001322004.1:c.1730del NP_001308933.1:p.Leu577ArgfsTer13
NM_001322005.1:c.1730del NP_001308934.1:p.Leu577ArgfsTer13
NM_001322006.1:c.1979del NP_001308935.1:p.Leu660ArgfsTer13
NM_001322007.1:c.1817del NP_001308936.1:p.Leu606ArgfsTer13
NM_001322008.1:c.1817del NP_001308937.1:p.Leu606ArgfsTer13
NM_001322009.1:c.1730del NP_001308938.1:p.Leu577ArgfsTer13
NM_001322010.1:c.1574del NP_001308939.1:p.Leu525ArgfsTer13
NM_001322011.1:c.1202del NP_001308940.1:p.Leu401ArgfsTer13
NM_001322012.1:c.1202del NP_001308941.1:p.Leu401ArgfsTer13
NM_001322013.1:c.1562del NP_001308942.1:p.Leu521ArgfsTer13
NM_001322014.1:c.2135del NP_001308943.1:p.Leu712ArgfsTer13
NM_001322015.1:c.1826del NP_001308944.1:p.Leu609ArgfsTer13
NR_136154.1:n.2222del
XM_006715744.4:c.1202del XP_006715807.1:p.Leu401ArgfsTer13
XM_017012342.2:c.1202del XP_016867831.1:p.Leu401ArgfsTer13
XM_024446800.1:c.1574del XP_024302568.1:p.Leu525ArgfsTer13
NM_000535.7:c.2135del MANE Select NP_000526.2:p.Leu712ArgfsTer13
NM_001322003.2:c.1730del NP_001308932.1:p.Leu577ArgfsTer13
NM_001322004.2:c.1730del NP_001308933.1:p.Leu577ArgfsTer13
NM_001322005.2:c.1730del NP_001308934.1:p.Leu577ArgfsTer13
NM_001322006.2:c.1979del NP_001308935.1:p.Leu660ArgfsTer13
NM_001322008.2:c.1817del NP_001308937.1:p.Leu606ArgfsTer13
NM_001322009.2:c.1730del NP_001308938.1:p.Leu577ArgfsTer13
NM_001322010.2:c.1574del NP_001308939.1:p.Leu525ArgfsTer13
NM_001322011.2:c.1202del NP_001308940.1:p.Leu401ArgfsTer13
NM_001322012.2:c.1202del NP_001308941.1:p.Leu401ArgfsTer13
NM_001322013.2:c.1562del NP_001308942.1:p.Leu521ArgfsTer13
NM_001322014.2:c.2135del NP_001308943.1:p.Leu712ArgfsTer13
NM_001322015.2:c.1826del NP_001308944.1:p.Leu609ArgfsTer13
NM_001322007.2:c.1817del NP_001308936.1:p.Leu606ArgfsTer13