Canonical Allele Identifier: CA2580069111
Gene: SOX2 HGNC NCBI
SOX2-OT HGNC NCBI

Linked Data

ClinVar Variation Id: 1709556
ClinVar RCV Id: RCV002289371

Genomic Alleles

HGVS Genome Assembly
NC_000003.12:g.181712601del , CM000665.2:g.181712601del GRCh38
NC_000003.11:g.181430389del , CM000665.1:g.181430389del GRCh37
NC_000003.10:g.182913083del NCBI36
NG_009080.1:g.5668del , LRG_719:g.5668del

Transcript Alleles

HGVS Amino-acid Change
ENST00000325404.3:c.241del (SOX2) MANE Select ENSP00000323588.1:p.Leu81PhefsTer22
ENST00000325404.2:c.241del (SOX2) ENSP00000323588.1:p.Leu81PhefsTer22
NM_003106.3:c.241del (SOX2) NP_003097.1:p.Leu81PhefsTer22
NR_004053.3:n.768-2584del (SOX2-OT)
NR_075089.1:n.767+12718del (SOX2-OT)
NR_075090.1:n.482-26968del (SOX2-OT)
NR_075091.1:n.783-2584del (SOX2-OT)
NR_075092.1:n.782+12718del (SOX2-OT)
NR_075093.1:n.473-26968del (SOX2-OT)
NM_003106.4:c.241del (SOX2) MANE Select NP_003097.1:p.Leu81PhefsTer22