Canonical Allele Identifier: CA2533469504
Gene: SCN1A HGNC NCBI

Linked Data

ClinVar Variation Id: 2167191
ClinVar RCV Id: RCV003098974

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.165991367_165991370dup , CM000664.2:g.165991367_165991370dup GRCh38
NC_000002.11:g.166847877_166847880dup , CM000664.1:g.166847877_166847880dup GRCh37
NC_000002.10:g.166556123_166556126dup NCBI36
NG_011906.1:g.87270_87273dup , LRG_8:g.87270_87273dup

Transcript Alleles

HGVS Amino-acid Change
ENST00000689288.1:c.*3941_*3944dup ENSP00000509637.1:n.*3941_*3944dup
ENST00000303395.9:c.5905_5908dup ENSP00000303540.4:p.Thr1970AsnfsTer6
ENST00000635750.1:c.5872_5875dup ENSP00000490799.1:p.Thr1959AsnfsTer6
ENST00000635776.1:c.*2738_*2741dup ENSP00000490692.1:n.*2738_*2741dup
ENST00000636194.1:c.*3398_*3401dup ENSP00000490288.1:n.*3398_*3401dup
ENST00000637038.1:c.2767_2770dup
ENST00000637988.1:c.5872_5875dup ENSP00000490780.1:p.Thr1959AsnfsTer6
ENST00000640036.1:c.5872_5875dup ENSP00000491573.1:p.Thr1959AsnfsTer6
ENST00000641575.1:c.5869_5872dup ENSP00000492917.1:p.Thr1958AsnfsTer6
ENST00000641603.1:c.5623_5626dup ENSP00000492945.1:p.Thr1876AsnfsTer6
ENST00000641996.1:c.*5459_*5462dup ENSP00000493054.1:n.*5459_*5462dup
ENST00000671940.1:c.*3848_*3851dup ENSP00000500336.1:n.*3848_*3851dup
ENST00000673490.1:n.8378_8381dup
ENST00000674923.1:c.5905_5908dup MANE Select ENSP00000501589.1:p.Thr1970AsnfsTer6
ENST00000303395.8:c.5905_5908dup ENSP00000303540.4:p.Thr1970AsnfsTer6
ENST00000375405.7:c.5872_5875dup ENSP00000364554.3:p.Thr1959AsnfsTer6
ENST00000409050.1:c.5821_5824dup ENSP00000386312.1:p.Thr1942AsnfsTer6
ENST00000423058.6:c.5905_5908dup ENSP00000407030.2:p.Thr1970AsnfsTer6
NM_001165963.1:c.5905_5908dup NP_001159435.1:p.Thr1970AsnfsTer6
NM_001165964.1:c.5821_5824dup NP_001159436.1:p.Thr1942AsnfsTer6
NM_001202435.1:c.5905_5908dup NP_001189364.1:p.Thr1970AsnfsTer6
NM_006920.4:c.5872_5875dup , LRG_8t1:c.5872_5875dup NP_008851.3:p.Thr1959AsnfsTer6
NR_110598.1:n.176-24246_176-24243dup
XM_011511598.1:c.5905_5908dup XP_011509900.1:p.Thr1970AsnfsTer6
XM_011511599.1:c.5905_5908dup XP_011509901.1:p.Thr1970AsnfsTer6
XM_011511600.1:c.5905_5908dup XP_011509902.1:p.Thr1970AsnfsTer6
XM_011511601.1:c.5905_5908dup XP_011509903.1:p.Thr1970AsnfsTer6
XM_011511602.1:c.5905_5908dup XP_011509904.1:p.Thr1970AsnfsTer6
XM_011511603.1:c.5902_5905dup XP_011509905.1:p.Thr1969AsnfsTer6
XM_011511604.1:c.5872_5875dup XP_011509906.1:p.Thr1959AsnfsTer6
XM_011511605.1:c.5869_5872dup XP_011509907.1:p.Thr1958AsnfsTer6
XM_011511606.1:c.5821_5824dup XP_011509908.1:p.Thr1942AsnfsTer6
XM_011511607.1:c.5623_5626dup XP_011509909.1:p.Thr1876AsnfsTer6
NM_001165963.2:c.5905_5908dup NP_001159435.1:p.Thr1970AsnfsTer6
NM_001165964.2:c.5821_5824dup NP_001159436.1:p.Thr1942AsnfsTer6
NM_001202435.2:c.5905_5908dup NP_001189364.1:p.Thr1970AsnfsTer6
NM_001353948.1:c.5905_5908dup NP_001340877.1:p.Thr1970AsnfsTer6
NM_001353949.1:c.5872_5875dup NP_001340878.1:p.Thr1959AsnfsTer6
NM_001353950.1:c.5872_5875dup NP_001340879.1:p.Thr1959AsnfsTer6
NM_001353951.1:c.5872_5875dup NP_001340880.1:p.Thr1959AsnfsTer6
NM_001353952.1:c.5872_5875dup NP_001340881.1:p.Thr1959AsnfsTer6
NM_001353954.1:c.5869_5872dup NP_001340883.1:p.Thr1958AsnfsTer6
NM_001353955.1:c.5869_5872dup NP_001340884.1:p.Thr1958AsnfsTer6
NM_001353957.1:c.5821_5824dup NP_001340886.1:p.Thr1942AsnfsTer6
NM_001353958.1:c.5821_5824dup NP_001340887.1:p.Thr1942AsnfsTer6
NM_001353960.1:c.5818_5821dup NP_001340889.1:p.Thr1941AsnfsTer6
NM_001353961.1:c.3463_3466dup NP_001340890.1:p.Thr1156AsnfsTer6
NM_006920.5:c.5872_5875dup NP_008851.3:p.Thr1959AsnfsTer6
NR_148667.1:n.6341_6344dup
XR_001738883.1:n.6355_6358dup
XR_001738884.1:n.6327_6330dup
NM_001165963.3:c.5905_5908dup NP_001159435.1:p.Thr1970AsnfsTer6
NM_001165964.3:c.5821_5824dup NP_001159436.1:p.Thr1942AsnfsTer6
NM_001202435.3:c.5905_5908dup NP_001189364.1:p.Thr1970AsnfsTer6
NM_001353948.2:c.5905_5908dup NP_001340877.1:p.Thr1970AsnfsTer6
NM_001353949.2:c.5872_5875dup NP_001340878.1:p.Thr1959AsnfsTer6
NM_001353950.2:c.5872_5875dup NP_001340879.1:p.Thr1959AsnfsTer6
NM_001353951.2:c.5872_5875dup NP_001340880.1:p.Thr1959AsnfsTer6
NM_001353952.2:c.5872_5875dup NP_001340881.1:p.Thr1959AsnfsTer6
NM_001353954.2:c.5869_5872dup NP_001340883.1:p.Thr1958AsnfsTer6
NM_001353955.2:c.5869_5872dup NP_001340884.1:p.Thr1958AsnfsTer6
NM_001353957.2:c.5821_5824dup NP_001340886.1:p.Thr1942AsnfsTer6
NM_001353958.2:c.5821_5824dup NP_001340887.1:p.Thr1942AsnfsTer6
NM_001353960.2:c.5818_5821dup NP_001340889.1:p.Thr1941AsnfsTer6
NM_001353961.2:c.3463_3466dup NP_001340890.1:p.Thr1156AsnfsTer6
NM_006920.6:c.5872_5875dup NP_008851.3:p.Thr1959AsnfsTer6
NR_148667.2:n.6322_6325dup
NM_001165963.4:c.5905_5908dup MANE Select NP_001159435.1:p.Thr1970AsnfsTer6