Canonical Allele Identifier: CA235733
Gene: NPHP4 HGNC NCBI

Linked Data

ClinVar Variation Id: 190976
dbSNP Id: rs373369949
gnomAD v2: 1-5934602-G-A
gnomAD v3: 1-5874542-G-A
gnomAD v4: 1-5874542-G-A

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.5874542G>A , CM000663.2:g.5874542G>A GRCh38
NC_000001.10:g.5934602G>A , CM000663.1:g.5934602G>A GRCh37
NC_000001.9:g.5857189G>A NCBI36
NG_011724.2:g.122930C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000378156.9:c.3160C>T MANE Select ENSP00000367398.4:p.Arg1054Cys
ENST00000378156.8:c.3160C>T ENSP00000367398.4:p.Arg1054Cys
ENST00000378169.7:c.*2061C>T ENSP00000367411.3:n.*2061C>T
ENST00000478423.6:n.2892C>T
ENST00000489180.6:c.*971C>T ENSP00000423747.1:n.*971C>T
NM_001291593.1:c.1621C>T NP_001278522.1:p.Arg541Cys
NM_001291594.1:c.1624C>T NP_001278523.1:p.Arg542Cys
NM_015102.4:c.3160C>T NP_055917.1:p.Arg1054Cys
NR_111987.1:n.3975C>T
XM_006710563.2:c.3160C>T XP_006710626.1:p.Arg1054Cys
XM_006710565.2:c.3160C>T XP_006710628.1:p.Arg1054Cys
XM_011541213.1:c.3157C>T XP_011539515.1:p.Arg1053Cys
XM_011541214.1:c.3118C>T XP_011539516.1:p.Arg1040Cys
XM_011541215.1:c.3049C>T XP_011539517.1:p.Arg1017Cys
XM_011541216.1:c.3160C>T XP_011539518.1:p.Arg1054Cys
XM_011541217.1:c.3160C>T XP_011539519.1:p.Arg1054Cys
XM_011541218.1:c.3160C>T XP_011539520.1:p.Arg1054Cys
XM_011541219.1:c.3106C>T XP_011539521.1:p.Arg1036Cys
XM_011541220.1:c.3160C>T XP_011539522.1:p.Arg1054Cys
XR_946604.1:n.3082+332C>T
XM_006710563.3:c.3160C>T XP_006710626.1:p.Arg1054Cys
XM_011541216.2:c.3160C>T XP_011539518.1:p.Arg1054Cys
XM_011541217.2:c.3160C>T XP_011539519.1:p.Arg1054Cys
XM_011541218.2:c.3160C>T XP_011539520.1:p.Arg1054Cys
XM_017000996.1:c.3115C>T XP_016856485.1:p.Arg1039Cys
XM_017000997.1:c.3160C>T XP_016856486.1:p.Arg1054Cys
XM_017000998.1:c.3160C>T XP_016856487.1:p.Arg1054Cys
XM_017000999.1:c.2632C>T XP_016856488.1:p.Arg878Cys
XM_017001000.2:c.2632C>T XP_016856489.1:p.Arg878Cys
XM_017001001.1:c.2362C>T XP_016856490.1:p.Arg788Cys
XM_017001003.1:c.1621C>T XP_016856492.1:p.Arg541Cys
XR_001737114.1:n.3198C>T
XR_001737115.1:n.3082+332C>T
NM_015102.5:c.3160C>T MANE Select NP_055917.1:p.Arg1054Cys
NM_001291593.2:c.1621C>T NP_001278522.1:p.Arg541Cys
NM_001291594.2:c.1624C>T NP_001278523.1:p.Arg542Cys
NR_111987.2:n.3927C>T