Canonical Allele Identifier: CA232460
Gene: CLN3 HGNC NCBI

Linked Data

ClinVar Variation Id: 136785
dbSNP Id: rs201206239

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.28477603C>T , CM000678.2:g.28477603C>T GRCh38
NC_000016.9:g.28488924C>T , CM000678.1:g.28488924C>T GRCh37
NC_000016.8:g.28396425C>T NCBI36
NG_008654.2:g.19700G>A , LRG_689:g.19700G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000333496.14:c.1158G>A ENSP00000329171.9:p.Ala386=
ENST00000355477.10:c.1086G>A ENSP00000347660.7:p.Ala362=
ENST00000357857.14:c.1068G>A ENSP00000350523.9:p.Ala356=
ENST00000359984.12:c.1230G>A ENSP00000353073.9:p.Ala410=
ENST00000360019.8:c.1158G>A ENSP00000353116.3:p.Ala386=
ENST00000395653.9:c.771G>A ENSP00000379014.5:p.Ala257=
ENST00000561689.6:n.1643G>A
ENST00000564091.6:c.570G>A ENSP00000454466.2:p.Ala190=
ENST00000565316.6:c.1179G>A ENSP00000456117.1:p.Ala393=
ENST00000567963.6:c.1068G>A ENSP00000455387.2:p.Ala356=
ENST00000568076.6:n.1659G>A
ENST00000568422.6:c.*467G>A ENSP00000455549.2:n.*467G>A
ENST00000568452.6:n.1461G>A
ENST00000569430.7:c.1230G>A ENSP00000454229.1:p.Ala410=
ENST00000628023.3:c.*526G>A ENSP00000486178.1:n.*526G>A
ENST00000635861.1:c.*882G>A ENSP00000490034.1:n.*882G>A
ENST00000635887.1:c.1230G>A ENSP00000490709.1:p.Ala410=
ENST00000635958.1:n.1637G>A
ENST00000636017.1:c.*754G>A ENSP00000490538.1:n.*754G>A
ENST00000636078.1:n.1352G>A
ENST00000636147.2:c.1230G>A MANE Select ENSP00000490105.1:p.Ala410=
ENST00000636172.1:c.*754G>A ENSP00000490505.1:n.*754G>A
ENST00000636228.1:c.924G>A ENSP00000489627.1:p.Ala308=
ENST00000636351.1:n.1124G>A
ENST00000636503.1:c.*260G>A ENSP00000489824.1:n.*260G>A
ENST00000636766.1:c.1230G>A ENSP00000489841.1:p.Ala410=
ENST00000636839.1:n.1726G>A
ENST00000636853.1:n.2243G>A
ENST00000636866.1:c.*25G>A ENSP00000490880.1:n.*25G>A
ENST00000636907.1:n.1381G>A
ENST00000636977.1:n.2722G>A
ENST00000637050.1:n.1619G>A
ENST00000637100.1:c.1006-3341G>A ENSP00000490394.1:n.1006-3341G>A
ENST00000637107.1:c.*754G>A ENSP00000490248.1:n.*754G>A
ENST00000637184.1:c.*260G>A ENSP00000489952.1:n.*260G>A
ENST00000637299.1:c.*1039G>A ENSP00000489823.1:n.*1039G>A
ENST00000637376.1:c.*260G>A ENSP00000490758.1:n.*260G>A
ENST00000637378.1:c.228+4502G>A ENSP00000490831.1:n.228+4502G>A
ENST00000637578.1:c.*754G>A ENSP00000490206.1:n.*754G>A
ENST00000637699.1:c.1141G>A ENSP00000490049.1:n.1141G>A
ENST00000637745.1:c.667G>A
ENST00000637871.1:c.*928G>A ENSP00000490670.1:n.*928G>A
ENST00000638036.1:c.392G>A
ENST00000333496.13:c.1158G>A ENSP00000329171.9:p.Ala386=
ENST00000355477.9:c.*467G>A ENSP00000347660.6:n.*467G>A
ENST00000357806.11:c.933G>A ENSP00000350457.7:p.Ala311=
ENST00000357857.13:c.1068G>A ENSP00000350523.9:p.Ala356=
ENST00000359984.11:c.924G>A ENSP00000353073.8:p.Ala308=
ENST00000360019.6:c.1230G>A ENSP00000353116.2:p.Ala410=
ENST00000395653.8:c.930G>A ENSP00000379014.4:p.Ala310=
ENST00000561689.5:n.1199G>A
ENST00000563874.5:n.2758G>A
ENST00000564091.5:c.319G>A
ENST00000565140.5:c.1138G>A ENSP00000455342.1:n.1138G>A
ENST00000565316.5:c.1179G>A ENSP00000456117.1:p.Ala393=
ENST00000565354.5:n.543G>A
ENST00000566057.5:c.844G>A ENSP00000456693.1:n.844G>A
ENST00000567963.5:c.939G>A ENSP00000455387.1:p.Ala313=
ENST00000568076.5:n.1141G>A
ENST00000568224.4:c.996G>A ENSP00000454253.1:p.Ala332=
ENST00000568422.5:c.*467G>A ENSP00000455549.1:n.*467G>A
ENST00000568452.5:n.1358G>A
ENST00000569030.5:c.1022G>A ENSP00000454680.1:n.1022G>A
ENST00000569430.5:c.1230G>A ENSP00000454229.1:p.Ala410=
ENST00000628023.2:c.*526G>A ENSP00000486178.1:n.*526G>A
ENST00000631023.2:c.939G>A ENSP00000486616.1:p.Ala313=
NM_000086.2:c.1230G>A , LRG_689t1:c.1230G>A NP_000077.1:p.Ala410=
NM_001042432.1:c.1230G>A , LRG_689t2:c.1230G>A NP_001035897.1:p.Ala410=
NM_001286104.1:c.1158G>A NP_001273033.1:p.Ala386=
NM_001286105.1:c.930G>A NP_001273034.1:p.Ala310=
NM_001286109.1:c.996G>A NP_001273038.1:p.Ala332=
NM_001286110.1:c.1068G>A NP_001273039.1:p.Ala356=
NM_001042432.2:c.1230G>A MANE Select NP_001035897.1:p.Ala410=
NM_001286104.2:c.1158G>A NP_001273033.1:p.Ala386=
NM_001286105.2:c.930G>A NP_001273034.1:p.Ala310=
NM_001286109.2:c.996G>A NP_001273038.1:p.Ala332=
NM_001286110.2:c.1068G>A NP_001273039.1:p.Ala356=