Canonical Allele Identifier: CA221451
Gene: CLN3 HGNC NCBI

Linked Data

ClinVar Variation Id: 93505
dbSNP Id: rs145967477

Genomic Alleles

HGVS Genome Assembly
NC_000016.10:g.28484028G>A , CM000678.2:g.28484028G>A GRCh38
NC_000016.9:g.28495349G>A , CM000678.1:g.28495349G>A GRCh37
NC_000016.8:g.28402850G>A NCBI36
NG_008654.2:g.13275C>T , LRG_689:g.13275C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000333496.14:c.696C>T ENSP00000329171.9:p.Thr232=
ENST00000355477.10:c.624C>T ENSP00000347660.7:p.Thr208=
ENST00000357857.14:c.606C>T ENSP00000350523.9:p.Thr202=
ENST00000359984.12:c.768C>T ENSP00000353073.9:p.Thr256=
ENST00000360019.8:c.696C>T ENSP00000353116.3:p.Thr232=
ENST00000395653.9:c.309C>T ENSP00000379014.5:p.Thr103=
ENST00000561689.6:n.1053C>T
ENST00000564091.6:c.108C>T ENSP00000454466.2:p.Thr36=
ENST00000565316.6:c.768C>T ENSP00000456117.1:p.Thr256=
ENST00000565778.6:c.399C>T ENSP00000458015.1:p.Thr133=
ENST00000566083.6:n.1226C>T
ENST00000566824.6:n.748C>T
ENST00000567963.6:c.606C>T ENSP00000455387.2:p.Thr202=
ENST00000568076.6:n.895C>T
ENST00000568422.6:c.*5C>T ENSP00000455549.2:n.*5C>T
ENST00000568452.6:n.871C>T
ENST00000568472.6:n.644C>T
ENST00000568497.6:c.-202C>T ENSP00000456414.2:n.-202C>T
ENST00000568558.6:c.471C>T ENSP00000455603.2:p.Thr157=
ENST00000569430.7:c.768C>T ENSP00000454229.1:p.Thr256=
ENST00000628023.3:c.*64C>T ENSP00000486178.1:n.*64C>T
ENST00000635861.1:c.*292C>T ENSP00000490034.1:n.*292C>T
ENST00000635887.1:c.768C>T ENSP00000490709.1:p.Thr256=
ENST00000635958.1:n.879C>T
ENST00000635973.1:c.519C>T ENSP00000490363.1:p.Thr173=
ENST00000636017.1:c.*292C>T ENSP00000490538.1:n.*292C>T
ENST00000636078.1:n.810C>T
ENST00000636147.2:c.768C>T MANE Select ENSP00000490105.1:p.Thr256=
ENST00000636172.1:c.*292C>T ENSP00000490505.1:n.*292C>T
ENST00000636228.1:c.462C>T ENSP00000489627.1:p.Thr154=
ENST00000636351.1:n.488C>T
ENST00000636503.1:c.768C>T ENSP00000489824.1:p.Thr256=
ENST00000636685.1:n.275C>T
ENST00000636766.1:c.768C>T ENSP00000489841.1:p.Thr256=
ENST00000636839.1:n.920C>T
ENST00000636853.1:n.1683C>T
ENST00000636866.1:c.768C>T ENSP00000490880.1:p.Thr256=
ENST00000636907.1:n.919C>T
ENST00000636977.1:n.1836C>T
ENST00000637050.1:n.855C>T
ENST00000637100.1:c.768C>T ENSP00000490394.1:p.Thr256=
ENST00000637107.1:c.*292C>T ENSP00000490248.1:n.*292C>T
ENST00000637184.1:c.768C>T ENSP00000489952.1:p.Thr256=
ENST00000637299.1:c.*577C>T ENSP00000489823.1:n.*577C>T
ENST00000637376.1:c.768C>T ENSP00000490758.1:p.Thr256=
ENST00000637578.1:c.*292C>T ENSP00000490206.1:n.*292C>T
ENST00000637699.1:c.551C>T ENSP00000490049.1:n.551C>T
ENST00000637745.1:c.107C>T
ENST00000637871.1:c.*292C>T ENSP00000490670.1:n.*292C>T
ENST00000333496.13:c.696C>T ENSP00000329171.9:p.Thr232=
ENST00000355477.9:c.*5C>T ENSP00000347660.6:n.*5C>T
ENST00000357806.11:c.471C>T ENSP00000350457.7:p.Thr157=
ENST00000357857.13:c.606C>T ENSP00000350523.9:p.Thr202=
ENST00000359984.11:c.462C>T ENSP00000353073.8:p.Thr154=
ENST00000360019.6:c.768C>T ENSP00000353116.2:p.Thr256=
ENST00000395653.8:c.468C>T ENSP00000379014.4:p.Thr156=
ENST00000561689.5:n.609C>T
ENST00000563874.5:n.2122C>T
ENST00000564574.5:n.816C>T
ENST00000565047.1:n.362C>T
ENST00000565140.5:c.551C>T ENSP00000455342.1:n.551C>T
ENST00000565316.5:c.768C>T ENSP00000456117.1:p.Thr256=
ENST00000565688.5:c.519C>T ENSP00000456122.1:p.Thr173=
ENST00000565778.5:c.399C>T ENSP00000458015.1:p.Thr133=
ENST00000566057.5:c.382C>T ENSP00000456693.1:n.382C>T
ENST00000566083.5:n.999C>T
ENST00000566824.5:n.817C>T
ENST00000567495.5:c.*5C>T ENSP00000456013.1:n.*5C>T
ENST00000567963.5:c.768C>T ENSP00000455387.1:p.Thr256=
ENST00000568076.5:n.551C>T
ENST00000568224.4:c.534C>T ENSP00000454253.1:p.Thr178=
ENST00000568422.5:c.*5C>T ENSP00000455549.1:n.*5C>T
ENST00000568452.5:n.768C>T
ENST00000568472.5:n.248C>T
ENST00000568497.5:c.*64C>T ENSP00000456414.1:n.*64C>T
ENST00000568558.5:c.309C>T ENSP00000455603.1:p.Thr103=
ENST00000569030.5:c.461-1356C>T ENSP00000454680.1:n.461-1356C>T
ENST00000569430.5:c.768C>T ENSP00000454229.1:p.Thr256=
ENST00000628023.2:c.*64C>T ENSP00000486178.1:n.*64C>T
ENST00000631023.2:c.768C>T ENSP00000486616.1:p.Thr256=
NM_000086.2:c.768C>T , LRG_689t1:c.768C>T NP_000077.1:p.Thr256=
NM_001042432.1:c.768C>T , LRG_689t2:c.768C>T NP_001035897.1:p.Thr256=
NM_001286104.1:c.696C>T NP_001273033.1:p.Thr232=
NM_001286105.1:c.468C>T NP_001273034.1:p.Thr156=
NM_001286109.1:c.534C>T NP_001273038.1:p.Thr178=
NM_001286110.1:c.606C>T NP_001273039.1:p.Thr202=
NM_001042432.2:c.768C>T MANE Select NP_001035897.1:p.Thr256=
NM_001286104.2:c.696C>T NP_001273033.1:p.Thr232=
NM_001286105.2:c.468C>T NP_001273034.1:p.Thr156=
NM_001286109.2:c.534C>T NP_001273038.1:p.Thr178=
NM_001286110.2:c.606C>T NP_001273039.1:p.Thr202=