Canonical Allele Identifier: CA205828

Gene: SYNE1

Linked Data

• ClinVar Variation Id: 212336
• ClinVar RCV Id: RCV000192775 ; RCV000366885 ; RCV000733162 ; RCV000714721 ; RCV001857703
• dbSNP Id: rs139075013
• ExAC: 6:152652489 C / T
• gnomAD v2: 6-152652489-C-T
• gnomAD v3: 6-152331354-C-T
• gnomAD v4: 6-152331354-C-T
• MyVariant Identifiers: chr6:g.152652489C>T (hg19) ; chr6:g.152331354C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000006.12:g.152331354C>T , CM000668.2:g.152331354C>T	GRCh38
NC_000006.11:g.152652489C>T , CM000668.1:g.152652489C>T	GRCh37
NC_000006.10:g.152694182C>T	NCBI36
NG_012855.1:g.311046G>A
NG_012855.2:g.311046G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000367255.10:c.13331G>A MANE Select	ENSP00000356224.5:p.Arg4444Gln
ENST00000423061.6:c.13118G>A	ENSP00000396024.1:p.Arg4373Gln
ENST00000341594.9:c.12875G>A	ENSP00000341887.6:p.Arg4292Gln
ENST00000367255.9:c.13331G>A	ENSP00000356224.5:p.Arg4444Gln
ENST00000423061.5:c.13118G>A	ENSP00000396024.1:p.Arg4373Gln
ENST00000448038.2:c.-2588G>A	ENSP00000390975.2:n.-2588G>A
ENST00000490135.6:n.677G>A
NM_033071.3:c.13118G>A	NP_149062.1:p.Arg4373Gln
NM_182961.3:c.13331G>A	NP_892006.3:p.Arg4444Gln
XM_006715407.1:c.13352G>A	XP_006715470.1:p.Arg4451Gln
XM_006715408.1:c.13352G>A	XP_006715471.1:p.Arg4451Gln
XM_006715409.1:c.13331G>A	XP_006715472.1:p.Arg4444Gln
XM_006715410.1:c.13352G>A	XP_006715473.1:p.Arg4451Gln
XM_006715411.1:c.13301G>A	XP_006715474.1:p.Arg4434Gln
XM_006715412.1:c.13352G>A	XP_006715475.1:p.Arg4451Gln
XM_006715413.1:c.13352G>A	XP_006715476.1:p.Arg4451Gln
XM_006715414.1:c.13280G>A	XP_006715477.1:p.Arg4427Gln
XM_006715415.1:c.13352G>A	XP_006715478.1:p.Arg4451Gln
XM_006715416.1:c.13352G>A	XP_006715479.1:p.Arg4451Gln
XM_006715417.1:c.13352G>A	XP_006715480.1:p.Arg4451Gln
XM_006715420.1:c.13352G>A	XP_006715483.1:p.Arg4451Gln
XM_006715421.1:c.13196G>A	XP_006715484.1:p.Arg4399Gln
XM_006715422.1:c.13193G>A	XP_006715485.1:p.Arg4398Gln
XM_006715423.1:c.13352G>A	XP_006715486.1:p.Arg4451Gln
XM_006715424.1:c.13352G>A	XP_006715487.1:p.Arg4451Gln
XM_006715425.1:c.13352G>A	XP_006715488.1:p.Arg4451Gln
XM_011535641.1:c.13352G>A	XP_011533943.1:p.Arg4451Gln
XM_011535642.1:c.13352G>A	XP_011533944.1:p.Arg4451Gln
XM_011535643.1:c.13187G>A	XP_011533945.1:p.Arg4396Gln
XM_011535644.1:c.11627G>A	XP_011533946.1:p.Arg3876Gln
XM_011535645.1:c.11120G>A	XP_011533947.1:p.Arg3707Gln
XM_011535646.1:c.13352G>A	XP_011533948.1:p.Arg4451Gln
XM_011535647.1:c.6587G>A	XP_011533949.1:p.Arg2196Gln
XM_006715408.2:c.13352G>A	XP_006715471.1:p.Arg4451Gln
XM_006715410.2:c.13352G>A	XP_006715473.1:p.Arg4451Gln
XM_006715412.2:c.13352G>A	XP_006715475.1:p.Arg4451Gln
XM_006715413.2:c.13352G>A	XP_006715476.1:p.Arg4451Gln
XM_006715415.2:c.13352G>A	XP_006715478.1:p.Arg4451Gln
XM_006715416.2:c.13352G>A	XP_006715479.1:p.Arg4451Gln
XM_006715417.2:c.13352G>A	XP_006715480.1:p.Arg4451Gln
XM_006715420.2:c.13352G>A	XP_006715483.1:p.Arg4451Gln
XM_006715421.2:c.13196G>A	XP_006715484.1:p.Arg4399Gln
XM_006715423.2:c.13352G>A	XP_006715486.1:p.Arg4451Gln
XM_006715424.2:c.13352G>A	XP_006715487.1:p.Arg4451Gln
XM_006715425.2:c.13352G>A	XP_006715488.1:p.Arg4451Gln
XM_011535641.2:c.13352G>A	XP_011533943.1:p.Arg4451Gln
XM_011535642.2:c.13352G>A	XP_011533944.1:p.Arg4451Gln
XM_011535645.2:c.11120G>A	XP_011533947.1:p.Arg3707Gln
XM_017010608.1:c.13352G>A	XP_016866097.1:p.Arg4451Gln
XM_017010609.1:c.13352G>A	XP_016866098.1:p.Arg4451Gln
XM_017010610.1:c.13331G>A	XP_016866099.1:p.Arg4444Gln
XM_017010611.2:c.13325G>A	XP_016866100.1:p.Arg4442Gln
XM_017010612.1:c.13274G>A	XP_016866101.1:p.Arg4425Gln
XM_017010613.1:c.13352G>A	XP_016866102.1:p.Arg4451Gln
XM_017010614.1:c.13352G>A	XP_016866103.1:p.Arg4451Gln
XM_017010615.1:c.13352G>A	XP_016866104.1:p.Arg4451Gln
XM_017010616.1:c.13352G>A	XP_016866105.1:p.Arg4451Gln
XM_017010617.1:c.13352G>A	XP_016866106.1:p.Arg4451Gln
XM_017010618.1:c.13352G>A	XP_016866107.1:p.Arg4451Gln
XM_017010619.1:c.11627G>A	XP_016866108.1:p.Arg3876Gln
XR_001743287.1:n.13835G>A
NM_182961.4:c.13331G>A MANE Select	NP_892006.3:p.Arg4444Gln
NM_033071.5:c.13118G>A	NP_149062.2:p.Arg4373Gln