Canonical Allele Identifier: CA16610853

Gene: MSH2

Linked Data

• ClinVar Variation Id: 408461
• ClinVar RCV Id: RCV000468897 ; RCV000491423 ; RCV001194032 ; RCV000985819 ; RCV003449129 ; RCV004000776
• dbSNP Id: rs12476364
• gnomAD v4: 2-47416295-G-T
• MyVariant Identifiers: chr2:g.47643434G>T (hg19) ; chr2:g.47416295G>T (hg38)
• PubMed: PMID:25782445 ; PMID:28874130

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47416295G>T , CM000664.2:g.47416295G>T	GRCh38
NC_000002.11:g.47643434G>T , CM000664.1:g.47643434G>T	GRCh37
NC_000002.10:g.47496938G>T	NCBI36
NG_007110.2:g.18172G>T , LRG_218:g.18172G>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.943-1G>T	ENSP00000495641.2:n.943-1G>T
ENST00000233146.7:c.943-1G>T MANE Select	ENSP00000233146.2:n.943-1G>T
ENST00000543555.6:c.745-1G>T	ENSP00000442697.1:n.745-1G>T
ENST00000644092.1:c.943-1G>T	ENSP00000496351.1:n.943-1G>T
ENST00000645339.1:c.943-1G>T	ENSP00000496441.1:n.943-1G>T
ENST00000645506.1:c.943-1G>T	ENSP00000495455.1:n.943-1G>T
ENST00000646415.1:c.943-1G>T	ENSP00000495543.1:n.943-1G>T
ENST00000233146.6:c.943-1G>T	ENSP00000233146.2:n.943-1G>T
ENST00000406134.5:c.943-1G>T	ENSP00000384199.1:n.943-1G>T
ENST00000543555.5:c.745-1G>T	ENSP00000442697.1:n.745-1G>T
ENST00000610696.4:c.943-1G>T	ENSP00000483159.1:n.943-1G>T
ENST00000613514.4:c.943-1G>T	ENSP00000484137.1:n.943-1G>T
ENST00000617333.3:c.943-1G>T	ENSP00000482468.1:n.943-1G>T
ENST00000617938.4:c.943-1G>T	ENSP00000481158.1:n.943-1G>T
ENST00000621359.2:c.943-1G>T	ENSP00000481416.1:n.943-1G>T
NM_000251.2:c.943-1G>T , LRG_218t1:c.943-1G>T	NP_000242.1:n.943-1G>T
NM_001258281.1:c.745-1G>T	NP_001245210.1:n.745-1G>T
XM_005264332.2:c.943-1G>T	XP_005264389.2:n.943-1G>T
XM_011532867.1:c.943-1G>T	XP_011531169.1:n.943-1G>T
XR_939685.1:n.1015-1G>T
XM_005264332.4:c.943-1G>T	XP_005264389.2:n.943-1G>T
XM_011532867.2:c.943-1G>T	XP_011531169.1:n.943-1G>T
XR_001738747.2:n.1005-1G>T
XR_939685.2:n.1005-1G>T
NM_000251.3:c.943-1G>T MANE Select	NP_000242.1:n.943-1G>T