Canonical Allele Identifier: CA1653015

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• dbSNP Id: rs770259976
• ExAC: 2:48915356 T / C
• gnomAD v2: 2-48915356-T-C
• gnomAD v4: 2-48688217-T-C
• MyVariant Identifiers: chr2:g.48915356T>C (hg19) ; chr2:g.48688217T>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688217T>C , CM000664.2:g.48688217T>C	GRCh38
NC_000002.11:g.48915356T>C , CM000664.1:g.48915356T>C	GRCh37
NC_000002.10:g.48768860T>C	NCBI36
NG_008193.1:g.72525A>G
NG_033050.1:g.163293T>C
NG_008193.2:g.72525A>G
NG_033050.2:g.163293T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1580A>G (LHCGR) MANE Select	ENSP00000294954.6:p.Tyr527Cys
ENST00000294954.11:c.1580A>G (LHCGR)	ENSP00000294954.6:p.Tyr527Cys
ENST00000401907.5:c.948-78A>G (LHCGR)	ENSP00000385406.1:n.948-78A>G
ENST00000402114.6:c.3441+16537T>C (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16537T>C
ENST00000403273.5:c.*324A>G (LHCGR)	ENSP00000385847.1:n.*324A>G
ENST00000405626.5:c.1499A>G (LHCGR)	ENSP00000386033.1:p.Tyr500Cys
ENST00000508440.1:c.276+16537T>C (GTF2A1L)	ENSP00000421474.1:n.276+16537T>C
ENST00000602369.3:c.*220+6007A>G	ENSP00000473498.1:n.*220+6007A>G
NM_000233.3:c.1580A>G (LHCGR)	NP_000224.2:p.Tyr527Cys
NM_001198593.1:c.3441+16537T>C (STON1-GTF2A1L)	NP_001185522.1:n.3441+16537T>C
XM_005264309.2:c.623A>G (LHCGR)	XP_005264366.1:p.Tyr208Cys
XM_006712015.2:c.650A>G (LHCGR)	XP_006712078.1:p.Tyr217Cys
XM_011532828.1:c.1505A>G (LHCGR)	XP_011531130.1:p.Tyr502Cys
XM_011532829.1:c.1319A>G (LHCGR)	XP_011531131.1:p.Tyr440Cys
XM_011532830.1:c.1238A>G (LHCGR)	XP_011531132.1:p.Tyr413Cys
XM_011532831.1:c.944A>G (LHCGR)	XP_011531133.1:p.Tyr315Cys
XM_011532832.1:c.650A>G (LHCGR)	XP_011531134.1:p.Tyr217Cys
XM_011532833.1:c.650A>G (LHCGR)	XP_011531135.1:p.Tyr217Cys
XM_011532834.1:c.623A>G (LHCGR)	XP_011531136.1:p.Tyr208Cys
XM_005264309.3:c.623A>G (LHCGR)	XP_005264366.1:p.Tyr208Cys
XM_006712015.3:c.650A>G (LHCGR)	XP_006712078.1:p.Tyr217Cys
XM_011532834.2:c.623A>G (LHCGR)	XP_011531136.1:p.Tyr208Cys
XM_017004089.1:c.1325A>G (LHCGR)	XP_016859578.1:p.Tyr442Cys
XM_017004090.1:c.944A>G (LHCGR)	XP_016859579.1:p.Tyr315Cys
NM_000233.4:c.1580A>G (LHCGR) MANE Select	NP_000224.2:p.Tyr527Cys
NM_001198593.2:c.3441+16537T>C (STON1-GTF2A1L)	NP_001185522.1:n.3441+16537T>C