Canonical Allele Identifier: CA1653011

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• dbSNP Id: rs766173514
• ExAC: 2:48915327 C / T
• gnomAD v2: 2-48915327-C-T
• gnomAD v4: 2-48688188-C-T
• MyVariant Identifiers: chr2:g.48915327C>T (hg19) ; chr2:g.48688188C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48688188C>T , CM000664.2:g.48688188C>T	GRCh38
NC_000002.11:g.48915327C>T , CM000664.1:g.48915327C>T	GRCh37
NC_000002.10:g.48768831C>T	NCBI36
NG_008193.1:g.72554G>A
NG_033050.1:g.163264C>T
NG_008193.2:g.72554G>A
NG_033050.2:g.163264C>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1609G>A (LHCGR) MANE Select	ENSP00000294954.6:p.Val537Met
ENST00000294954.11:c.1609G>A (LHCGR)	ENSP00000294954.6:p.Val537Met
ENST00000401907.5:c.948-49G>A (LHCGR)	ENSP00000385406.1:n.948-49G>A
ENST00000402114.6:c.3441+16508C>T (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16508C>T
ENST00000403273.5:c.*353G>A (LHCGR)	ENSP00000385847.1:n.*353G>A
ENST00000405626.5:c.1528G>A (LHCGR)	ENSP00000386033.1:p.Val510Met
ENST00000508440.1:c.276+16508C>T (GTF2A1L)	ENSP00000421474.1:n.276+16508C>T
ENST00000602369.3:c.*220+6036G>A	ENSP00000473498.1:n.*220+6036G>A
NM_000233.3:c.1609G>A (LHCGR)	NP_000224.2:p.Val537Met
NM_001198593.1:c.3441+16508C>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16508C>T
XM_005264309.2:c.652G>A (LHCGR)	XP_005264366.1:p.Val218Met
XM_006712015.2:c.679G>A (LHCGR)	XP_006712078.1:p.Val227Met
XM_011532828.1:c.1534G>A (LHCGR)	XP_011531130.1:p.Val512Met
XM_011532829.1:c.1348G>A (LHCGR)	XP_011531131.1:p.Val450Met
XM_011532830.1:c.1267G>A (LHCGR)	XP_011531132.1:p.Val423Met
XM_011532831.1:c.973G>A (LHCGR)	XP_011531133.1:p.Val325Met
XM_011532832.1:c.679G>A (LHCGR)	XP_011531134.1:p.Val227Met
XM_011532833.1:c.679G>A (LHCGR)	XP_011531135.1:p.Val227Met
XM_011532834.1:c.652G>A (LHCGR)	XP_011531136.1:p.Val218Met
XM_005264309.3:c.652G>A (LHCGR)	XP_005264366.1:p.Val218Met
XM_006712015.3:c.679G>A (LHCGR)	XP_006712078.1:p.Val227Met
XM_011532834.2:c.652G>A (LHCGR)	XP_011531136.1:p.Val218Met
XM_017004089.1:c.1354G>A (LHCGR)	XP_016859578.1:p.Val452Met
XM_017004090.1:c.973G>A (LHCGR)	XP_016859579.1:p.Val325Met
NM_000233.4:c.1609G>A (LHCGR) MANE Select	NP_000224.2:p.Val537Met
NM_001198593.2:c.3441+16508C>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16508C>T