Canonical Allele Identifier: CA1652954

Gene: LHCGR STON1-GTF2A1L GTF2A1L

Linked Data

• dbSNP Id: rs13006488
• ExAC: 2:48914955 A / T
• gnomAD v2: 2-48914955-A-T
• gnomAD v4: 2-48687816-A-T
• MyVariant Identifiers: chr2:g.48914955A>T (hg19) ; chr2:g.48687816A>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.48687816A>T , CM000664.2:g.48687816A>T	GRCh38
NC_000002.11:g.48914955A>T , CM000664.1:g.48914955A>T	GRCh37
NC_000002.10:g.48768459A>T	NCBI36
NG_008193.1:g.72926T>A
NG_033050.1:g.162892A>T
NG_008193.2:g.72926T>A
NG_033050.2:g.162892A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000294954.12:c.1981T>A (LHCGR) MANE Select	ENSP00000294954.6:p.Ser661Thr
ENST00000294954.11:c.1981T>A (LHCGR)	ENSP00000294954.6:p.Ser661Thr
ENST00000401907.5:c.*293T>A (LHCGR)	ENSP00000385406.1:n.*293T>A
ENST00000402114.6:c.3441+16136A>T (STON1-GTF2A1L)	ENSP00000385701.1:n.3441+16136A>T
ENST00000403273.5:c.*725T>A (LHCGR)	ENSP00000385847.1:n.*725T>A
ENST00000405626.5:c.1900T>A (LHCGR)	ENSP00000386033.1:p.Ser634Thr
ENST00000508440.1:c.276+16136A>T (GTF2A1L)	ENSP00000421474.1:n.276+16136A>T
ENST00000602369.3:c.*220+6408T>A	ENSP00000473498.1:n.*220+6408T>A
NM_000233.3:c.1981T>A (LHCGR)	NP_000224.2:p.Ser661Thr
NM_001198593.1:c.3441+16136A>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16136A>T
XM_005264309.2:c.1024T>A (LHCGR)	XP_005264366.1:p.Ser342Thr
XM_006712015.2:c.1051T>A (LHCGR)	XP_006712078.1:p.Ser351Thr
XM_011532828.1:c.1906T>A (LHCGR)	XP_011531130.1:p.Ser636Thr
XM_011532829.1:c.1720T>A (LHCGR)	XP_011531131.1:p.Ser574Thr
XM_011532830.1:c.1639T>A (LHCGR)	XP_011531132.1:p.Ser547Thr
XM_011532831.1:c.1345T>A (LHCGR)	XP_011531133.1:p.Ser449Thr
XM_011532832.1:c.1051T>A (LHCGR)	XP_011531134.1:p.Ser351Thr
XM_011532833.1:c.1051T>A (LHCGR)	XP_011531135.1:p.Ser351Thr
XM_011532834.1:c.1024T>A (LHCGR)	XP_011531136.1:p.Ser342Thr
XM_005264309.3:c.1024T>A (LHCGR)	XP_005264366.1:p.Ser342Thr
XM_006712015.3:c.1051T>A (LHCGR)	XP_006712078.1:p.Ser351Thr
XM_011532834.2:c.1024T>A (LHCGR)	XP_011531136.1:p.Ser342Thr
XM_017004089.1:c.1726T>A (LHCGR)	XP_016859578.1:p.Ser576Thr
XM_017004090.1:c.1345T>A (LHCGR)	XP_016859579.1:p.Ser449Thr
NM_000233.4:c.1981T>A (LHCGR) MANE Select	NP_000224.2:p.Ser661Thr
NM_001198593.2:c.3441+16136A>T (STON1-GTF2A1L)	NP_001185522.1:n.3441+16136A>T