Canonical Allele Identifier: CA1304837703
Gene: SCN1A HGNC NCBI

Genomic Alleles

HGVS Genome Assembly
NC_000002.12:g.165991969T= , CM000664.2:g.165991969T= GRCh38
NC_000002.11:g.166848479T= , CM000664.1:g.166848479T= GRCh37
NC_000002.10:g.166556725T= NCBI36
NG_011906.1:g.86671A= , LRG_8:g.86671A=

Transcript Alleles

HGVS Amino-acid Change
ENST00000689288.1:c.*3342A= ENSP00000509637.1:n.*3342A=
ENST00000303395.9:c.5306A= ENSP00000303540.4:p.Tyr1769=
ENST00000635750.1:c.5273A= ENSP00000490799.1:p.Tyr1758=
ENST00000635776.1:c.*2139A= ENSP00000490692.1:n.*2139A=
ENST00000636194.1:c.*2799A= ENSP00000490288.1:n.*2799A=
ENST00000637038.1:c.2168A=
ENST00000637988.1:c.5273A= ENSP00000490780.1:p.Tyr1758=
ENST00000640036.1:c.5273A= ENSP00000491573.1:p.Tyr1758=
ENST00000641575.1:c.5270A= ENSP00000492917.1:p.Tyr1757=
ENST00000641603.1:c.5024A= ENSP00000492945.1:p.Tyr1675=
ENST00000641996.1:c.*4860A= ENSP00000493054.1:n.*4860A=
ENST00000671940.1:c.*3249A= ENSP00000500336.1:n.*3249A=
ENST00000673490.1:n.7779A=
ENST00000674923.1:c.5306A= MANE Select ENSP00000501589.1:p.Tyr1769=
ENST00000303395.8:c.5306A= ENSP00000303540.4:p.Tyr1769=
ENST00000375405.7:c.5273A= ENSP00000364554.3:p.Tyr1758=
ENST00000409050.1:c.5222A= ENSP00000386312.1:p.Tyr1741=
ENST00000423058.6:c.5306A= ENSP00000407030.2:p.Tyr1769=
NM_001165963.1:c.5306A= NP_001159435.1:p.Tyr1769=
NM_001165964.1:c.5222A= NP_001159436.1:p.Tyr1741=
NM_001202435.1:c.5306A= NP_001189364.1:p.Tyr1769=
NM_006920.4:c.5273A= , LRG_8t1:c.5273A= NP_008851.3:p.Tyr1758=
NR_110598.1:n.176-23644T=
XM_011511598.1:c.5306A= XP_011509900.1:p.Tyr1769=
XM_011511599.1:c.5306A= XP_011509901.1:p.Tyr1769=
XM_011511600.1:c.5306A= XP_011509902.1:p.Tyr1769=
XM_011511601.1:c.5306A= XP_011509903.1:p.Tyr1769=
XM_011511602.1:c.5306A= XP_011509904.1:p.Tyr1769=
XM_011511603.1:c.5303A= XP_011509905.1:p.Tyr1768=
XM_011511604.1:c.5273A= XP_011509906.1:p.Tyr1758=
XM_011511605.1:c.5270A= XP_011509907.1:p.Tyr1757=
XM_011511606.1:c.5222A= XP_011509908.1:p.Tyr1741=
XM_011511607.1:c.5024A= XP_011509909.1:p.Tyr1675=
NM_001165963.2:c.5306A= NP_001159435.1:p.Tyr1769=
NM_001165964.2:c.5222A= NP_001159436.1:p.Tyr1741=
NM_001202435.2:c.5306A= NP_001189364.1:p.Tyr1769=
NM_001353948.1:c.5306A= NP_001340877.1:p.Tyr1769=
NM_001353949.1:c.5273A= NP_001340878.1:p.Tyr1758=
NM_001353950.1:c.5273A= NP_001340879.1:p.Tyr1758=
NM_001353951.1:c.5273A= NP_001340880.1:p.Tyr1758=
NM_001353952.1:c.5273A= NP_001340881.1:p.Tyr1758=
NM_001353954.1:c.5270A= NP_001340883.1:p.Tyr1757=
NM_001353955.1:c.5270A= NP_001340884.1:p.Tyr1757=
NM_001353957.1:c.5222A= NP_001340886.1:p.Tyr1741=
NM_001353958.1:c.5222A= NP_001340887.1:p.Tyr1741=
NM_001353960.1:c.5219A= NP_001340889.1:p.Tyr1740=
NM_001353961.1:c.2864A= NP_001340890.1:p.Tyr955=
NM_006920.5:c.5273A= NP_008851.3:p.Tyr1758=
NR_148667.1:n.5742A=
XR_001738883.1:n.5756A=
XR_001738884.1:n.5728A=
NM_001165963.3:c.5306A= NP_001159435.1:p.Tyr1769=
NM_001165964.3:c.5222A= NP_001159436.1:p.Tyr1741=
NM_001202435.3:c.5306A= NP_001189364.1:p.Tyr1769=
NM_001353948.2:c.5306A= NP_001340877.1:p.Tyr1769=
NM_001353949.2:c.5273A= NP_001340878.1:p.Tyr1758=
NM_001353950.2:c.5273A= NP_001340879.1:p.Tyr1758=
NM_001353951.2:c.5273A= NP_001340880.1:p.Tyr1758=
NM_001353952.2:c.5273A= NP_001340881.1:p.Tyr1758=
NM_001353954.2:c.5270A= NP_001340883.1:p.Tyr1757=
NM_001353955.2:c.5270A= NP_001340884.1:p.Tyr1757=
NM_001353957.2:c.5222A= NP_001340886.1:p.Tyr1741=
NM_001353958.2:c.5222A= NP_001340887.1:p.Tyr1741=
NM_001353960.2:c.5219A= NP_001340889.1:p.Tyr1740=
NM_001353961.2:c.2864A= NP_001340890.1:p.Tyr955=
NM_006920.6:c.5273A= NP_008851.3:p.Tyr1758=
NR_148667.2:n.5723A=
NM_001165963.4:c.5306A= MANE Select NP_001159435.1:p.Tyr1769=