Canonical Allele Identifier: CA1189920261

Gene: PTPN22 AP4B1-AS1

Genomic Alleles

HGVS	Genome Assembly
NC_000001.11:g.113830001T= , CM000663.2:g.113830001T=	GRCh38
NC_000001.10:g.114372623T= , CM000663.1:g.114372623T=	GRCh37
NC_000001.9:g.114174146T=	NCBI36
NG_011432.1:g.46753A=

Transcript Alleles

HGVS	Amino-acid Change
ENST00000359785.10:c.2082A= (PTPN22) MANE Select	ENSP00000352833.5:p.Pro694=
ENST00000359785.9:c.2082A= (PTPN22)	ENSP00000352833.5:p.Pro694=
ENST00000420377.6:c.2082A= (PTPN22)	ENSP00000388229.2:p.Pro694=
ENST00000460620.5:c.469-10347A= (PTPN22)	ENSP00000433141.1:n.469-10347A=
ENST00000525799.1:c.1701A= (PTPN22)	ENSP00000432674.1:p.Pro567=
ENST00000528414.5:c.1917A= (PTPN22)	ENSP00000435176.1:p.Pro639=
ENST00000532224.5:c.*1360A= (PTPN22)	ENSP00000431249.1:n.*1360A=
ENST00000538253.5:c.2010A= (PTPN22)	ENSP00000439372.2:p.Pro670=
NM_001193431.1:c.1998A= (PTPN22)	NP_001180360.1:p.Pro666=
NM_001193431.2:c.1998A= (PTPN22)	NP_001180360.1:p.Pro666=
NM_001308297.1:c.2010A= (PTPN22)	NP_001295226.1:p.Pro670=
NM_012411.4:c.1917A= (PTPN22)	NP_036543.4:p.Pro639=
NM_012411.5:c.1917A= (PTPN22)	NP_036543.4:p.Pro639=
NM_015967.5:c.2082A= (PTPN22)	NP_057051.3:p.Pro694=
NM_015967.6:c.2082A= (PTPN22)	NP_057051.3:p.Pro694=
NR_125965.1:n.414+14529T= (AP4B1-AS1)
XM_011541221.1:c.2004A= (PTPN22)	XP_011539523.1:p.Pro668=
XM_011541222.1:c.2082A= (PTPN22)	XP_011539524.1:p.Pro694=
XM_011541224.1:c.1638A= (PTPN22)	XP_011539526.1:p.Pro546=
XM_011541225.1:c.2010A= (PTPN22)	XP_011539527.1:p.Pro670=
XM_011541225.2:c.2010A= (PTPN22)	XP_011539527.1:p.Pro670=
XM_017001004.1:c.2082A= (PTPN22)	XP_016856493.1:p.Pro694=
XM_017001005.2:c.1737A= (PTPN22)	XP_016856494.1:p.Pro579=
NM_015967.7:c.2082A= (PTPN22)	NP_057051.3:p.Pro694=
NM_015967.8:c.2082A= (PTPN22) MANE Select	NP_057051.4:p.Pro694=