Canonical Allele Identifier: CA10611582

Gene: SCN9A SCN1A-AS1

Linked Data

• ClinVar Variation Id: 331895
• ClinVar RCV Id: RCV000273901 ; RCV000328915 ; RCV000324427 ; RCV000368490
• dbSNP Id: rs186838828
• gnomAD v2: 2-167051756-T-A
• gnomAD v3: 2-166195246-T-A
• gnomAD v4: 2-166195246-T-A
• MyVariant Identifiers: chr2:g.167051756T>A (hg19) ; chr2:g.166195246T>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.166195246T>A , CM000664.2:g.166195246T>A	GRCh38
NC_000002.11:g.167051756T>A , CM000664.1:g.167051756T>A	GRCh37
NC_000002.10:g.166760002T>A	NCBI36
NG_012798.1:g.185742A>T , LRG_369:g.185742A>T

Transcript Alleles

HGVS	Amino-acid Change
ENST00000303354.11:c.*3426A>T (SCN9A)	ENSP00000304748.7:n.*3426A>T
ENST00000642356.2:c.*3426A>T (SCN9A) MANE Select	ENSP00000495601.1:n.*3426A>T
ENST00000303354.10:c.*3426A>T (SCN9A)	ENSP00000304748.7:n.*3426A>T
ENST00000409672.5:c.*3426A>T (SCN9A)	ENSP00000386306.1:n.*3426A>T
NM_002977.3:c.*3426A>T , LRG_369t1:c.*3426A>T (SCN9A)	NP_002968.1:n.*3426A>T
NR_110260.1:n.432-4393T>A (SCN1A-AS1)
NM_001365536.1:c.*3426A>T (SCN9A) MANE Select	NP_001352465.1:n.*3426A>T