Canonical Allele Identifier: CA10603980
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 281837
dbSNP Id: rs886042244
gnomAD v2: 1-46659010-A-G
gnomAD v3: 1-46193338-A-G
gnomAD v4: 1-46193338-A-G

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46193338A>G , CM000663.2:g.46193338A>G GRCh38
NC_000001.10:g.46659010A>G , CM000663.1:g.46659010A>G GRCh37
NC_000001.9:g.46431597A>G NCBI36
NG_009205.2:g.31968T>C
NG_009205.3:g.31968T>C

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.1077T>C (POMGNT1) ENSP00000379698.4:p.Thr359=
ENST00000477114.2:n.1639T>C (POMGNT1)
ENST00000497439.6:n.1249T>C (POMGNT1)
ENST00000684817.1:n.1437T>C (POMGNT1)
ENST00000684898.1:n.1639T>C (POMGNT1)
ENST00000685230.1:c.*387T>C (POMGNT1) ENSP00000510305.1:n.*387T>C
ENST00000685275.1:n.1624T>C (POMGNT1)
ENST00000685444.1:c.978T>C (POMGNT1) ENSP00000510762.1:p.Thr326=
ENST00000685704.1:n.1639T>C (POMGNT1)
ENST00000685775.1:n.2604T>C (POMGNT1)
ENST00000685833.1:n.1955T>C (POMGNT1)
ENST00000686252.1:n.2151T>C (POMGNT1)
ENST00000686379.1:c.*201T>C (POMGNT1) ENSP00000508913.1:n.*201T>C
ENST00000686724.1:n.1249T>C (POMGNT1)
ENST00000686737.1:c.1077T>C (POMGNT1) ENSP00000508736.1:p.Thr359=
ENST00000687112.1:n.1639T>C (POMGNT1)
ENST00000687149.1:c.1077T>C (POMGNT1) ENSP00000509745.1:p.Thr359=
ENST00000687197.1:c.*17T>C (POMGNT1) ENSP00000510749.1:n.*17T>C
ENST00000687235.1:n.1639T>C (POMGNT1)
ENST00000687613.1:n.1827T>C (POMGNT1)
ENST00000687683.1:c.1077T>C (POMGNT1) ENSP00000508522.1:p.Thr359=
ENST00000688032.1:n.1639T>C (POMGNT1)
ENST00000688596.1:n.1424T>C (POMGNT1)
ENST00000688608.1:c.978T>C (POMGNT1) ENSP00000508890.1:p.Thr326=
ENST00000688919.1:n.2273T>C (POMGNT1)
ENST00000689031.1:n.1639T>C (POMGNT1)
ENST00000689717.1:n.1249T>C (POMGNT1)
ENST00000689756.1:c.*709T>C (POMGNT1) ENSP00000509023.1:n.*709T>C
ENST00000690377.1:n.1424T>C (POMGNT1)
ENST00000690678.1:c.1077T>C (POMGNT1) ENSP00000508703.1:p.Thr359=
ENST00000691209.1:c.*17T>C (POMGNT1) ENSP00000510112.1:n.*17T>C
ENST00000691243.1:c.1077T>C (POMGNT1) ENSP00000510654.1:p.Thr359=
ENST00000692169.1:n.1226T>C (POMGNT1)
ENST00000692202.1:n.1652T>C (POMGNT1)
ENST00000692322.1:c.*929T>C (POMGNT1) ENSP00000509017.1:n.*929T>C
ENST00000692369.1:c.1077T>C (POMGNT1) ENSP00000508453.1:p.Thr359=
ENST00000692599.1:n.1639T>C (POMGNT1)
ENST00000692635.1:c.*17T>C (POMGNT1) ENSP00000508425.1:n.*17T>C
ENST00000693168.1:n.1249T>C (POMGNT1)
ENST00000693218.1:c.1077T>C (POMGNT1) ENSP00000510577.1:p.Thr359=
ENST00000693223.1:n.1721T>C (POMGNT1)
ENST00000693365.1:n.3407T>C (POMGNT1)
ENST00000371984.8:c.1077T>C (POMGNT1) MANE Select ENSP00000361052.3:p.Thr359=
ENST00000371984.7:c.1077T>C (POMGNT1) ENSP00000361052.3:p.Thr359=
ENST00000371992.1:c.1077T>C (POMGNT1) ENSP00000361060.1:p.Thr359=
ENST00000396420.7:c.*746T>C (POMGNT1) ENSP00000379698.3:n.*746T>C
ENST00000485714.1:n.463T>C (POMGNT1)
NM_001243766.1:c.1077T>C (POMGNT1) NP_001230695.1:p.Thr359=
NM_001290129.1:c.1011T>C (POMGNT1) NP_001277058.1:p.Thr337=
NM_001290130.1:c.648T>C (POMGNT1) NP_001277059.1:p.Thr216=
NM_017739.3:c.1077T>C (POMGNT1) NP_060209.3:p.Thr359=
XM_005271010.1:c.1077T>C (POMGNT1) XP_005271067.1:p.Thr359=
XM_006710755.1:c.1077T>C (POMGNT1) XP_006710818.1:p.Thr359=
XM_006710756.1:c.1077T>C (POMGNT1) XP_006710819.1:p.Thr359=
XM_011540460.1:c.679-2864A>G (TSPAN1) XP_011538762.1:n.679-2864A>G
XM_011540461.1:c.634-2864A>G (TSPAN1) XP_011538763.1:n.634-2864A>G
XM_011541759.1:c.1011T>C (POMGNT1) XP_011540061.1:p.Thr337=
XM_011541760.1:c.1011T>C (POMGNT1) XP_011540062.1:p.Thr337=
XM_011541761.1:c.-17T>C (POMGNT1) XP_011540063.1:n.-17T>C
XR_946706.1:n.1236T>C (POMGNT1)
XM_011540460.3:c.679-2864A>G (TSPAN1) XP_011538762.1:n.679-2864A>G
XM_011541760.3:c.1011T>C (POMGNT1) XP_011540062.1:p.Thr337=
XM_017001690.1:c.1077T>C (POMGNT1) XP_016857179.1:p.Thr359=
NM_001243766.2:c.1077T>C (POMGNT1) NP_001230695.2:p.Thr359=
NM_001290129.2:c.1011T>C (POMGNT1) NP_001277058.2:p.Thr337=
NM_001290130.2:c.648T>C (POMGNT1) NP_001277059.2:p.Thr216=
NM_017739.4:c.1077T>C (POMGNT1) MANE Select NP_060209.4:p.Thr359=