Canonical Allele Identifier: CA10586398
Gene: POMGNT1 HGNC NCBI
TSPAN1 HGNC NCBI

Linked Data

ClinVar Variation Id: 254275
ClinVar RCV Id: RCV000240931
dbSNP Id: rs886037949

Genomic Alleles

HGVS Genome Assembly
NC_000001.11:g.46196073A>C , CM000663.2:g.46196073A>C GRCh38
NC_000001.10:g.46661745A>C , CM000663.1:g.46661745A>C GRCh37
NC_000001.9:g.46434332A>C NCBI36
NG_009205.2:g.29233T>G
NG_009205.3:g.29233T>G

Transcript Alleles

HGVS Amino-acid Change
ENST00000396420.8:c.359T>G (POMGNT1) ENSP00000379698.4:p.Leu120Arg
ENST00000477114.2:n.531T>G (POMGNT1)
ENST00000497439.6:n.531T>G (POMGNT1)
ENST00000684817.1:n.527T>G (POMGNT1)
ENST00000684898.1:n.531T>G (POMGNT1)
ENST00000685230.1:c.359T>G (POMGNT1) ENSP00000510305.1:p.Leu120Arg
ENST00000685275.1:n.516T>G (POMGNT1)
ENST00000685444.1:c.359T>G (POMGNT1) ENSP00000510762.1:p.Leu120Arg
ENST00000685704.1:n.531T>G (POMGNT1)
ENST00000685775.1:n.1304T>G (POMGNT1)
ENST00000685833.1:n.504T>G (POMGNT1)
ENST00000686252.1:n.1433T>G (POMGNT1)
ENST00000686379.1:c.359T>G (POMGNT1) ENSP00000508913.1:p.Leu120Arg
ENST00000686724.1:n.531T>G (POMGNT1)
ENST00000686737.1:c.359T>G (POMGNT1) ENSP00000508736.1:p.Leu120Arg
ENST00000687112.1:n.531T>G (POMGNT1)
ENST00000687149.1:c.359T>G (POMGNT1) ENSP00000509745.1:p.Leu120Arg
ENST00000687197.1:c.359T>G (POMGNT1) ENSP00000510749.1:p.Leu120Arg
ENST00000687235.1:n.531T>G (POMGNT1)
ENST00000687613.1:n.527T>G (POMGNT1)
ENST00000687683.1:c.359T>G (POMGNT1) ENSP00000508522.1:p.Leu120Arg
ENST00000688032.1:n.531T>G (POMGNT1)
ENST00000688596.1:n.531T>G (POMGNT1)
ENST00000688608.1:c.359T>G (POMGNT1) ENSP00000508890.1:p.Leu120Arg
ENST00000688919.1:n.1165T>G (POMGNT1)
ENST00000689031.1:n.531T>G (POMGNT1)
ENST00000689717.1:n.531T>G (POMGNT1)
ENST00000689756.1:c.240T>G (POMGNT1) ENSP00000509023.1:p.Ala80=
ENST00000690377.1:n.531T>G (POMGNT1)
ENST00000690678.1:c.359T>G (POMGNT1) ENSP00000508703.1:p.Leu120Arg
ENST00000691209.1:c.359T>G (POMGNT1) ENSP00000510112.1:p.Leu120Arg
ENST00000691243.1:c.359T>G (POMGNT1) ENSP00000510654.1:p.Leu120Arg
ENST00000692169.1:n.531T>G (POMGNT1)
ENST00000692202.1:n.527T>G (POMGNT1)
ENST00000692322.1:c.*211T>G (POMGNT1) ENSP00000509017.1:n.*211T>G
ENST00000692369.1:c.359T>G (POMGNT1) ENSP00000508453.1:p.Leu120Arg
ENST00000692599.1:n.531T>G (POMGNT1)
ENST00000692635.1:c.359T>G (POMGNT1) ENSP00000508425.1:p.Leu120Arg
ENST00000693168.1:n.531T>G (POMGNT1)
ENST00000693218.1:c.359T>G (POMGNT1) ENSP00000510577.1:p.Leu120Arg
ENST00000693223.1:n.1003T>G (POMGNT1)
ENST00000693365.1:n.1258T>G (POMGNT1)
ENST00000371984.8:c.359T>G (POMGNT1) MANE Select ENSP00000361052.3:p.Leu120Arg
ENST00000371984.7:c.359T>G (POMGNT1) ENSP00000361052.3:p.Leu120Arg
ENST00000371992.1:c.359T>G (POMGNT1) ENSP00000361060.1:p.Leu120Arg
ENST00000396420.7:c.359T>G (POMGNT1) ENSP00000379698.3:p.Leu120Arg
ENST00000489985.1:n.592T>G (POMGNT1)
ENST00000497439.5:n.483T>G (POMGNT1)
NM_001243766.1:c.359T>G (POMGNT1) NP_001230695.1:p.Leu120Arg
NM_001290129.1:c.293T>G (POMGNT1) NP_001277058.1:p.Leu98Arg
NM_001290130.1:c.-71T>G (POMGNT1) NP_001277059.1:n.-71T>G
NM_017739.3:c.359T>G (POMGNT1) NP_060209.3:p.Leu120Arg
XM_005271010.1:c.359T>G (POMGNT1) XP_005271067.1:p.Leu120Arg
XM_006710755.1:c.359T>G (POMGNT1) XP_006710818.1:p.Leu120Arg
XM_006710756.1:c.359T>G (POMGNT1) XP_006710819.1:p.Leu120Arg
XM_011540460.1:c.679-129A>C (TSPAN1) XP_011538762.1:n.679-129A>C
XM_011540461.1:c.634-129A>C (TSPAN1) XP_011538763.1:n.634-129A>C
XM_011541759.1:c.293T>G (POMGNT1) XP_011540061.1:p.Leu98Arg
XM_011541760.1:c.293T>G (POMGNT1) XP_011540062.1:p.Leu98Arg
XR_946706.1:n.518T>G (POMGNT1)
XM_011540460.3:c.679-129A>C (TSPAN1) XP_011538762.1:n.679-129A>C
XM_011541760.3:c.293T>G (POMGNT1) XP_011540062.1:p.Leu98Arg
XM_017001690.1:c.359T>G (POMGNT1) XP_016857179.1:p.Leu120Arg
NM_001243766.2:c.359T>G (POMGNT1) NP_001230695.2:p.Leu120Arg
NM_001290129.2:c.293T>G (POMGNT1) NP_001277058.2:p.Leu98Arg
NM_001290130.2:c.-71T>G (POMGNT1) NP_001277059.2:n.-71T>G
NM_017739.4:c.359T>G (POMGNT1) MANE Select NP_060209.4:p.Leu120Arg