Canonical Allele Identifier: CA10581989

Gene: MSH2

Linked Data

• ClinVar Variation Id: 237411
• ClinVar RCV Id: RCV000226454 ; RCV000664273 ; RCV001658053 ; RCV002282071 ; RCV003998766
• dbSNP Id: rs878853826
• gnomAD v2: 2-47630409-C-A
• gnomAD v4: 2-47403270-C-A
• MyVariant Identifiers: chr2:g.47630409C>A (hg19) ; chr2:g.47403270C>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47403270C>A , CM000664.2:g.47403270C>A	GRCh38
NC_000002.11:g.47630409C>A , CM000664.1:g.47630409C>A	GRCh37
NC_000002.10:g.47483913C>A	NCBI36
NG_007110.2:g.5147C>A , LRG_218:g.5147C>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000644900.2:c.79C>A	ENSP00000495641.2:p.Pro27Thr
ENST00000233146.7:c.79C>A MANE Select	ENSP00000233146.2:p.Pro27Thr
ENST00000543555.6:c.-30-90C>A	ENSP00000442697.1:n.-30-90C>A
ENST00000644092.1:c.79C>A	ENSP00000496351.1:p.Pro27Thr
ENST00000645339.1:c.79C>A	ENSP00000496441.1:p.Pro27Thr
ENST00000645506.1:c.79C>A	ENSP00000495455.1:p.Pro27Thr
ENST00000646415.1:c.79C>A	ENSP00000495543.1:p.Pro27Thr
ENST00000233146.6:c.79C>A	ENSP00000233146.2:p.Pro27Thr
ENST00000406134.5:c.79C>A	ENSP00000384199.1:p.Pro27Thr
ENST00000454849.5:c.-30-90C>A	ENSP00000411482.1:n.-30-90C>A
ENST00000543555.5:c.-30-90C>A	ENSP00000442697.1:n.-30-90C>A
ENST00000610696.4:c.79C>A	ENSP00000483159.1:p.Pro27Thr
ENST00000613514.4:c.79C>A	ENSP00000484137.1:p.Pro27Thr
ENST00000617333.3:c.79C>A	ENSP00000482468.1:p.Pro27Thr
ENST00000617938.4:c.79C>A	ENSP00000481158.1:p.Pro27Thr
ENST00000621359.2:c.79C>A	ENSP00000481416.1:p.Pro27Thr
NM_000251.2:c.79C>A , LRG_218t1:c.79C>A	NP_000242.1:p.Pro27Thr
NM_001258281.1:c.-30-90C>A	NP_001245210.1:n.-30-90C>A
XM_005264332.2:c.79C>A	XP_005264389.2:p.Pro27Thr
XM_011532867.1:c.79C>A	XP_011531169.1:p.Pro27Thr
XR_939685.1:n.151C>A
XM_005264332.4:c.79C>A	XP_005264389.2:p.Pro27Thr
XM_011532867.2:c.79C>A	XP_011531169.1:p.Pro27Thr
XR_001738747.2:n.141C>A
XR_939685.2:n.141C>A
NM_000251.3:c.79C>A MANE Select	NP_000242.1:p.Pro27Thr