Canonical Allele Identifier: CA10578129

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 230117
• ClinVar RCV Id: RCV000216842 ; RCV000227272 ; RCV000503628 ; RCV001080207 ; RCV003330587 ; RCV003997803
• dbSNP Id: rs876658397
• gnomAD v4: 2-47801062-G-C
• MyVariant Identifiers: chr2:g.48028201G>C (hg19) ; chr2:g.47801062G>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47801062G>C , CM000664.2:g.47801062G>C	GRCh38
NC_000002.11:g.48028201G>C , CM000664.1:g.48028201G>C	GRCh37
NC_000002.10:g.47881705G>C	NCBI36
NG_007111.1:g.22916G>C , LRG_219:g.22916G>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.2782G>C (MSH6)	ENSP00000406248.2:p.Val928Leu
ENST00000420813.6:c.2782G>C (MSH6)	ENSP00000390382.2:p.Val928Leu
ENST00000455383.6:c.2782G>C (MSH6)	ENSP00000397484.2:p.Val928Leu
ENST00000700004.2:c.3079G>C (MSH6)	ENSP00000514752.2:p.Val1027Leu
ENST00000699999.1:n.3163G>C (MSH6)
ENST00000700000.1:c.1606+1473G>C (MSH6)	ENSP00000514749.1:n.1606+1473G>C
ENST00000700002.1:c.3085G>C (MSH6)	ENSP00000514750.1:p.Val1029Leu
ENST00000700003.1:c.628-2358G>C (MSH6)	ENSP00000514751.1:n.628-2358G>C
ENST00000700004.1:c.2236G>C (MSH6)	ENSP00000514752.1:p.Val746Leu
ENST00000234420.11:c.3079G>C (MSH6) MANE Select	ENSP00000234420.5:p.Val1027Leu
ENST00000540021.6:c.2689G>C (MSH6)	ENSP00000446475.1:p.Val897Leu
ENST00000652107.1:c.2782G>C (MSH6)	ENSP00000498629.1:p.Val928Leu
ENST00000673637.1:c.2782G>C (MSH6)	ENSP00000501310.1:p.Val928Leu
ENST00000234420.9:c.3079G>C (MSH6)	ENSP00000234420.4:p.Val1027Leu
ENST00000405808.5:c.169+7133C>G (FBXO11)	ENSP00000385127.1:n.169+7133C>G
ENST00000434234.5:c.*124+6932C>G (FBXO11)	ENSP00000402692.1:n.*124+6932C>G
ENST00000445503.5:c.*2426G>C (MSH6)	ENSP00000405294.1:n.*2426G>C
ENST00000538136.1:c.2173G>C (MSH6)	ENSP00000438580.1:p.Val725Leu
ENST00000540021.5:c.2689G>C (MSH6)	ENSP00000446475.1:p.Val897Leu
ENST00000614496.4:c.2173G>C (MSH6)	ENSP00000477844.1:p.Val725Leu
ENST00000616033.4:c.3076G>C (MSH6)	ENSP00000480261.1:p.Val1026Leu
ENST00000622629.4:c.-18G>C (MSH6)	ENSP00000482078.1:n.-18G>C
NM_000179.2:c.3079G>C , LRG_219t1:c.3079G>C (MSH6)	NP_000170.1:p.Val1027Leu
NM_001281492.1:c.2689G>C (MSH6)	NP_001268421.1:p.Val897Leu
NM_001281493.1:c.2173G>C (MSH6)	NP_001268422.1:p.Val725Leu
NM_001281494.1:c.2173G>C (MSH6)	NP_001268423.1:p.Val725Leu
XM_005264271.1:c.2782G>C (MSH6)	XP_005264328.1:p.Val928Leu
XM_011532798.1:c.2896G>C (MSH6)	XP_011531100.1:p.Val966Leu
XM_011532799.1:c.2782G>C (MSH6)	XP_011531101.1:p.Val928Leu
XM_011532800.1:c.2782G>C (MSH6)	XP_011531102.1:p.Val928Leu
XM_024452819.1:c.3079G>C (MSH6)	XP_024308587.1:p.Val1027Leu
XM_024452820.1:c.2896G>C (MSH6)	XP_024308588.1:p.Val966Leu
XM_024452821.1:c.2782G>C (MSH6)	XP_024308589.1:p.Val928Leu
XM_024452822.1:c.2173G>C (MSH6)	XP_024308590.1:p.Val725Leu
NM_000179.3:c.3079G>C (MSH6) MANE Select	NP_000170.1:p.Val1027Leu
NM_001281492.2:c.2689G>C (MSH6)	NP_001268421.1:p.Val897Leu
NM_001281493.2:c.2173G>C (MSH6)	NP_001268422.1:p.Val725Leu
NM_001281494.2:c.2173G>C (MSH6)	NP_001268423.1:p.Val725Leu