Canonical Allele Identifier: CA10578088

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 233357
• ClinVar RCV Id: RCV000222892 ; RCV000478131 ; RCV000629954 ; RCV003998550
• dbSNP Id: rs768095444
• gnomAD v2: 2-48027079-G-A
• gnomAD v3: 2-47799940-G-A
• gnomAD v4: 2-47799940-G-A
• MyVariant Identifiers: chr2:g.48027079G>A (hg19) ; chr2:g.47799940G>A (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47799940G>A , CM000664.2:g.47799940G>A	GRCh38
NC_000002.11:g.48027079G>A , CM000664.1:g.48027079G>A	GRCh37
NC_000002.10:g.47880583G>A	NCBI36
NG_007111.1:g.21794G>A , LRG_219:g.21794G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.1660G>A (MSH6)	ENSP00000406248.2:p.Val554Met
ENST00000420813.6:c.1660G>A (MSH6)	ENSP00000390382.2:p.Val554Met
ENST00000455383.6:c.1660G>A (MSH6)	ENSP00000397484.2:p.Val554Met
ENST00000700004.2:c.1957G>A (MSH6)	ENSP00000514752.2:p.Val653Met
ENST00000699999.1:n.2041G>A (MSH6)
ENST00000700000.1:c.1606+351G>A (MSH6)	ENSP00000514749.1:n.1606+351G>A
ENST00000700002.1:c.1963G>A (MSH6)	ENSP00000514750.1:p.Val655Met
ENST00000700003.1:c.628-3480G>A (MSH6)	ENSP00000514751.1:n.628-3480G>A
ENST00000700004.1:c.1114G>A (MSH6)	ENSP00000514752.1:p.Val372Met
ENST00000234420.11:c.1957G>A (MSH6) MANE Select	ENSP00000234420.5:p.Val653Met
ENST00000540021.6:c.1567G>A (MSH6)	ENSP00000446475.1:p.Val523Met
ENST00000652107.1:c.1660G>A (MSH6)	ENSP00000498629.1:p.Val554Met
ENST00000673637.1:c.1660G>A (MSH6)	ENSP00000501310.1:p.Val554Met
ENST00000234420.9:c.1957G>A (MSH6)	ENSP00000234420.4:p.Val653Met
ENST00000405808.5:c.169+8255C>T (FBXO11)	ENSP00000385127.1:n.169+8255C>T
ENST00000434234.5:c.*124+8054C>T (FBXO11)	ENSP00000402692.1:n.*124+8054C>T
ENST00000445503.5:c.*1304G>A (MSH6)	ENSP00000405294.1:n.*1304G>A
ENST00000538136.1:c.1051G>A (MSH6)	ENSP00000438580.1:p.Val351Met
ENST00000540021.5:c.1567G>A (MSH6)	ENSP00000446475.1:p.Val523Met
ENST00000614496.4:c.1051G>A (MSH6)	ENSP00000477844.1:p.Val351Met
ENST00000616033.4:c.1954G>A (MSH6)	ENSP00000480261.1:p.Val652Met
ENST00000622629.4:c.-1140G>A (MSH6)	ENSP00000482078.1:n.-1140G>A
NM_000179.2:c.1957G>A , LRG_219t1:c.1957G>A (MSH6)	NP_000170.1:p.Val653Met
NM_001281492.1:c.1567G>A (MSH6)	NP_001268421.1:p.Val523Met
NM_001281493.1:c.1051G>A (MSH6)	NP_001268422.1:p.Val351Met
NM_001281494.1:c.1051G>A (MSH6)	NP_001268423.1:p.Val351Met
XM_005264271.1:c.1660G>A (MSH6)	XP_005264328.1:p.Val554Met
XM_011532798.1:c.1774G>A (MSH6)	XP_011531100.1:p.Val592Met
XM_011532799.1:c.1660G>A (MSH6)	XP_011531101.1:p.Val554Met
XM_011532800.1:c.1660G>A (MSH6)	XP_011531102.1:p.Val554Met
XM_024452819.1:c.1957G>A (MSH6)	XP_024308587.1:p.Val653Met
XM_024452820.1:c.1774G>A (MSH6)	XP_024308588.1:p.Val592Met
XM_024452821.1:c.1660G>A (MSH6)	XP_024308589.1:p.Val554Met
XM_024452822.1:c.1051G>A (MSH6)	XP_024308590.1:p.Val351Met
NM_000179.3:c.1957G>A (MSH6) MANE Select	NP_000170.1:p.Val653Met
NM_001281492.2:c.1567G>A (MSH6)	NP_001268421.1:p.Val523Met
NM_001281493.2:c.1051G>A (MSH6)	NP_001268422.1:p.Val351Met
NM_001281494.2:c.1051G>A (MSH6)	NP_001268423.1:p.Val351Met