Canonical Allele Identifier: CA10321213

Gene: SCO2 NCAPH2

Linked Data

• ClinVar Variation Id: 1303312
• ClinVar RCV Id: RCV001757867 ; RCV003941120
• dbSNP Id: rs752739324
• ExAC: 22:50962434 ATGTCAGGGCAGT / A
• gnomAD v2: 22-50962434-ATGTCAGGGCAGT-A
• gnomAD v3: 22-50524005-ATGTCAGGGCAGT-A
• gnomAD v4: 22-50524005-ATGTCAGGGCAGT-A
• MyVariant Identifiers: chr22:g.50962435_50962446del (hg19) ; chr22:g.50524006_50524017del (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000022.11:g.50524006_50524017del , CM000684.2:g.50524006_50524017del	GRCh38
NC_000022.10:g.50962435_50962446del , CM000684.1:g.50962435_50962446del	GRCh37
NC_000022.9:g.49309301_49309312del	NCBI36
NG_011860.1:g.11069_11080del , LRG_727:g.11069_11080del
NG_016235.1:g.7423_7434del
NG_021419.1:g.20791_20802del

Transcript Alleles

HGVS	Amino-acid Change
ENST00000395693.8:c.395_406del (SCO2) MANE Select	ENSP00000379046.4:p.His132_Ile136delinsLeu
ENST00000420993.7:c.*631_*642del (NCAPH2) MANE Select	ENSP00000410088.2:n.*631_*642del
ENST00000543927.6:c.395_406del (SCO2)	ENSP00000444433.1:p.His132_Ile136delinsLeu
ENST00000638598.2:c.395_406del (SCO2)	ENSP00000491753.2:p.His132_Ile136delinsLeu
ENST00000252785.3:c.395_406del	ENSP00000252785.3:p.His132_Ile136delinsLeu
ENST00000395693.7:c.395_406del	ENSP00000379046.3:p.His132_Ile136delinsLeu
ENST00000423348.1:c.395_406del	ENSP00000403570.1:p.His132_Ile136delinsLeu
ENST00000439934.5:c.395_406del	ENSP00000415642.1:p.His132_Ile136delinsLeu
ENST00000535425.5:c.395_406del	ENSP00000444242.1:p.His132_Ile136delinsLeu
ENST00000543927.5:c.395_406del	ENSP00000444433.1:p.His132_Ile136delinsLeu
NM_001169109.1:c.395_406del (SCO2)	NP_001162580.1:p.His132_Ile136delinsLeu
NM_001169110.1:c.395_406del (SCO2)	NP_001162581.1:p.His132_Ile136delinsLeu
NM_001169111.1:c.395_406del (SCO2)	NP_001162582.1:p.His132_Ile136delinsLeu
NM_001185011.1:c.*631_*642del (NCAPH2)	NP_001171940.1:n.*631_*642del
NM_005138.2:c.395_406del (SCO2)	NP_005129.2:p.His132_Ile136delinsLeu
NM_152299.3:c.*631_*642del (NCAPH2)	NP_689512.2:n.*631_*642del
XR_001755232.1:n.2659_2670del (NCAPH2)
NM_152299.4:c.*631_*642del (NCAPH2) MANE Select	NP_689512.2:n.*631_*642del
NM_001185011.2:c.*631_*642del (NCAPH2)	NP_001171940.1:n.*631_*642del
NM_005138.3:c.395_406del (SCO2) MANE Select	NP_005129.2:p.His132_Ile136delinsLeu
NM_001169109.2:c.395_406del (SCO2)	NP_001162580.1:p.His132_Ile136delinsLeu
NM_001169111.2:c.395_406del (SCO2)	NP_001162582.1:p.His132_Ile136delinsLeu