Canonical Allele Identifier: CA10163156
Gene: HPS4 HGNC NCBI

Linked Data

ClinVar Variation Id: 1542916
ClinVar RCV Id: RCV002167616
dbSNP Id: rs765753447

Genomic Alleles

HGVS Genome Assembly
NC_000022.11:g.26457900G>A , CM000684.2:g.26457900G>A GRCh38
NC_000022.10:g.26853866G>A , CM000684.1:g.26853866G>A GRCh37
NC_000022.9:g.25183866G>A NCBI36
NG_009763.2:g.30964C>T , LRG_590:g.30964C>T

Transcript Alleles

HGVS Amino-acid Change
ENST00000422379.3:c.1968C>T ENSP00000415081.3:p.Ser656=
ENST00000473782.2:c.1914C>T ENSP00000514223.1:p.Ser638=
ENST00000483631.2:c.1119C>T ENSP00000514228.1:p.Ser373=
ENST00000491142.2:c.1914C>T ENSP00000514221.1:p.Ser638=
ENST00000699226.1:n.4840C>T
ENST00000699227.1:c.*1258C>T ENSP00000514220.1:n.*1258C>T
ENST00000699228.1:n.2464C>T
ENST00000699229.1:n.1331C>T
ENST00000699230.1:n.2637C>T
ENST00000699231.1:n.4926C>T
ENST00000699232.1:n.3270C>T
ENST00000699233.1:n.1785C>T
ENST00000699234.1:c.*1258C>T ENSP00000514222.1:n.*1258C>T
ENST00000699235.1:c.1119C>T ENSP00000514224.1:p.Ser373=
ENST00000699236.1:c.*1103C>T ENSP00000514225.1:n.*1103C>T
ENST00000699237.1:c.*1103C>T ENSP00000514226.1:n.*1103C>T
ENST00000699238.1:c.*1457C>T ENSP00000514227.1:n.*1457C>T
ENST00000699239.1:n.4668C>T
ENST00000699240.1:c.*1571C>T ENSP00000514229.1:n.*1571C>T
ENST00000699241.1:c.*2106C>T ENSP00000514230.1:n.*2106C>T
ENST00000699242.1:c.1824C>T ENSP00000514231.1:p.Ser608=
ENST00000699243.1:c.*1258C>T ENSP00000514232.1:n.*1258C>T
ENST00000699244.1:c.1767C>T ENSP00000514233.1:p.Ser589=
ENST00000699245.1:n.1206C>T
ENST00000699246.1:c.*1285C>T ENSP00000514234.1:n.*1285C>T
ENST00000699247.1:c.870C>T ENSP00000514235.1:p.Ser290=
ENST00000699248.1:n.3784-4496C>T
ENST00000699249.1:c.*1058-4496C>T ENSP00000514236.1:n.*1058-4496C>T
ENST00000699250.1:c.1714-4496C>T ENSP00000514237.1:n.1714-4496C>T
ENST00000699251.1:c.1914C>T ENSP00000514238.1:p.Ser638=
ENST00000699252.1:n.2464C>T
ENST00000398145.7:c.1914C>T MANE Select ENSP00000381213.2:p.Ser638=
ENST00000336873.9:c.1914C>T ENSP00000338457.5:p.Ser638=
ENST00000398145.6:c.1914C>T ENSP00000381213.2:p.Ser638=
ENST00000402105.7:c.1899C>T ENSP00000384185.3:p.Ser633=
ENST00000429411.5:c.*1486C>T ENSP00000399705.1:n.*1486C>T
ENST00000439453.5:c.*1432C>T ENSP00000406764.1:n.*1432C>T
ENST00000464362.5:c.*2245C>T ENSP00000430291.1:n.*2245C>T
ENST00000466781.5:n.4773C>T
ENST00000485842.5:n.605C>T
ENST00000493455.6:n.477C>T
ENST00000496385.5:n.2480-4496C>T
ENST00000519774.5:n.300C>T
NM_022081.5:c.1914C>T , LRG_590t1:c.1914C>T NP_071364.4:p.Ser638=
NM_152841.2:c.1899C>T , LRG_590t2:c.1899C>T NP_690054.1:p.Ser633=
NR_073135.1:n.2600C>T
NR_073136.1:n.2362C>T
XM_006724353.2:c.1968C>T XP_006724416.1:p.Ser656=
XM_006724354.2:c.1968C>T XP_006724417.1:p.Ser656=
XM_006724360.2:c.1401C>T XP_006724423.1:p.Ser467=
XM_011530485.1:c.2046C>T XP_011528787.1:p.Ser682=
XM_011530486.1:c.2046C>T XP_011528788.1:p.Ser682=
XM_011530487.1:c.2046C>T XP_011528789.1:p.Ser682=
XM_011530488.1:c.2046C>T XP_011528790.1:p.Ser682=
XM_011530489.1:c.2046C>T XP_011528791.1:p.Ser682=
XM_011530490.1:c.1992C>T XP_011528792.1:p.Ser664=
XM_011530491.1:c.2046C>T XP_011528793.1:p.Ser682=
XM_011530492.1:c.2046C>T XP_011528794.1:p.Ser682=
XM_011530493.1:c.1846-4496C>T XP_011528795.1:n.1846-4496C>T
XM_011530494.1:c.1254C>T XP_011528796.1:p.Ser418=
XM_011530495.1:c.1401C>T XP_011528797.1:p.Ser467=
XM_011530496.1:c.1254C>T XP_011528798.1:p.Ser418=
XR_937947.1:n.2705C>T
NM_001349896.1:c.1914C>T NP_001336825.1:p.Ser638=
NM_001349898.1:c.1914C>T NP_001336827.1:p.Ser638=
NM_001349899.1:c.1914C>T NP_001336828.1:p.Ser638=
NM_001349900.1:c.1968C>T NP_001336829.1:p.Ser656=
NM_001349901.1:c.1968C>T NP_001336830.1:p.Ser656=
NM_001349902.1:c.1714-4496C>T NP_001336831.1:n.1714-4496C>T
NM_001349903.1:c.1714-4496C>T NP_001336832.1:n.1714-4496C>T
NM_001349904.1:c.1914C>T NP_001336833.1:p.Ser638=
NM_001349905.1:c.1914C>T NP_001336834.1:p.Ser638=
NR_146311.1:n.2691C>T
NR_146312.1:n.2516C>T
NR_146313.1:n.2536C>T
NR_146314.1:n.2667C>T
NR_146315.1:n.2607C>T
NR_146316.1:n.2582C>T
XM_006724360.3:c.1401C>T XP_006724423.1:p.Ser467=
XM_011530485.2:c.2046C>T XP_011528787.1:p.Ser682=
XM_011530486.2:c.2046C>T XP_011528788.1:p.Ser682=
XM_011530487.2:c.2046C>T XP_011528789.1:p.Ser682=
XM_011530488.2:c.2046C>T XP_011528790.1:p.Ser682=
XM_011530489.2:c.2046C>T XP_011528791.1:p.Ser682=
XM_011530490.3:c.1992C>T XP_011528792.1:p.Ser664=
XM_011530491.3:c.2046C>T XP_011528793.1:p.Ser682=
XM_011530492.2:c.2046C>T XP_011528794.1:p.Ser682=
XM_011530493.3:c.1846-4496C>T XP_011528795.1:n.1846-4496C>T
XM_011530494.2:c.1254C>T XP_011528796.1:p.Ser418=
XM_011530495.2:c.1401C>T XP_011528797.1:p.Ser467=
XM_011530496.2:c.1254C>T XP_011528798.1:p.Ser418=
XM_017029045.2:c.1992C>T XP_016884534.1:p.Ser664=
XM_017029046.2:c.1914C>T XP_016884535.1:p.Ser638=
XM_017029047.2:c.1792-4496C>T XP_016884536.1:n.1792-4496C>T
XM_017029052.2:c.1506C>T XP_016884541.1:p.Ser502=
XM_017029053.1:c.1491C>T XP_016884542.1:p.Ser497=
XM_017029056.2:c.1119C>T XP_016884545.1:p.Ser373=
XM_017029061.2:c.1119C>T XP_016884550.1:p.Ser373=
XM_017029062.2:c.1119C>T XP_016884551.1:p.Ser373=
XM_017029063.2:c.1119C>T XP_016884552.1:p.Ser373=
XM_017029064.2:c.1119C>T XP_016884553.1:p.Ser373=
XM_024452298.1:c.1287C>T XP_024308066.1:p.Ser429=
XM_024452299.1:c.1119C>T XP_024308067.1:p.Ser373=
XM_024452300.1:c.1119C>T XP_024308068.1:p.Ser373=
XR_001755361.2:n.2622C>T
XR_001755364.1:n.2278-4496C>T
XR_001755366.2:n.3151C>T
XR_002958721.1:n.2500-4496C>T
XR_937947.2:n.2700C>T
NM_001349898.2:c.1914C>T NP_001336827.1:p.Ser638=
NM_001349899.2:c.1914C>T NP_001336828.1:p.Ser638=
NM_001349900.2:c.1968C>T NP_001336829.1:p.Ser656=
NM_001349903.2:c.1714-4496C>T NP_001336832.1:n.1714-4496C>T
NM_001349904.2:c.1914C>T NP_001336833.1:p.Ser638=
NR_073136.2:n.2169C>T
NR_146311.2:n.2611C>T
NR_146313.2:n.2456C>T
NR_146315.2:n.2527C>T
NM_022081.6:c.1914C>T MANE Select NP_071364.4:p.Ser638=
NR_146316.2:n.2502C>T