Linked Data
ClinVar Variation Id:
479947
dbSNP Id:
rs778287080
ExAC:
2:48028007 T / C
gnomAD v2:
2-48028007-T-C
gnomAD v3:
2-47800868-T-C
gnomAD v4:
2-47800868-T-C
Genomic Alleles
| HGVS | Genome Assembly |
|---|---|
| NC_000002.12:g.47800868T>C , CM000664.2:g.47800868T>C | GRCh38 |
| NC_000002.11:g.48028007T>C , CM000664.1:g.48028007T>C | GRCh37 |
| NC_000002.10:g.47881511T>C | NCBI36 |
| NG_007111.1:g.22722T>C , LRG_219:g.22722T>C |
Transcript Alleles
| HGVS | Amino-acid Change | |
|---|---|---|
| ENST00000411819.2:c.2588T>C (MSH6) | ENSP00000406248.2:p.Ile863Thr | |
| ENST00000420813.6:c.2588T>C (MSH6) | ENSP00000390382.2:p.Ile863Thr | |
| ENST00000455383.6:c.2588T>C (MSH6) | ENSP00000397484.2:p.Ile863Thr | |
| ENST00000700004.2:c.2885T>C (MSH6) | ENSP00000514752.2:p.Ile962Thr | |
| ENST00000699999.1:n.2969T>C (MSH6) | ||
| ENST00000700000.1:c.1606+1279T>C (MSH6) | ENSP00000514749.1:n.1606+1279T>C | |
| ENST00000700002.1:c.2891T>C (MSH6) | ENSP00000514750.1:p.Ile964Thr | |
| ENST00000700003.1:c.628-2552T>C (MSH6) | ENSP00000514751.1:n.628-2552T>C | |
| ENST00000700004.1:c.2042T>C (MSH6) | ENSP00000514752.1:p.Ile681Thr | |
| ENST00000234420.11:c.2885T>C (MSH6) MANE Select | ENSP00000234420.5:p.Ile962Thr | |
| ENST00000540021.6:c.2495T>C (MSH6) | ENSP00000446475.1:p.Ile832Thr | |
| ENST00000652107.1:c.2588T>C (MSH6) | ENSP00000498629.1:p.Ile863Thr | |
| ENST00000673637.1:c.2588T>C (MSH6) | ENSP00000501310.1:p.Ile863Thr | |
| ENST00000234420.9:c.2885T>C (MSH6) | ENSP00000234420.4:p.Ile962Thr | |
| ENST00000405808.5:c.169+7327A>G (FBXO11) | ENSP00000385127.1:n.169+7327A>G | |
| ENST00000434234.5:c.*124+7126A>G (FBXO11) | ENSP00000402692.1:n.*124+7126A>G | |
| ENST00000445503.5:c.*2232T>C (MSH6) | ENSP00000405294.1:n.*2232T>C | |
| ENST00000538136.1:c.1979T>C (MSH6) | ENSP00000438580.1:p.Ile660Thr | |
| ENST00000540021.5:c.2495T>C (MSH6) | ENSP00000446475.1:p.Ile832Thr | |
| ENST00000614496.4:c.1979T>C (MSH6) | ENSP00000477844.1:p.Ile660Thr | |
| ENST00000616033.4:c.2882T>C (MSH6) | ENSP00000480261.1:p.Ile961Thr | |
| ENST00000622629.4:c.-212T>C (MSH6) | ENSP00000482078.1:n.-212T>C | |
| NM_000179.2:c.2885T>C , LRG_219t1:c.2885T>C (MSH6) | NP_000170.1:p.Ile962Thr | |
| NM_001281492.1:c.2495T>C (MSH6) | NP_001268421.1:p.Ile832Thr | |
| NM_001281493.1:c.1979T>C (MSH6) | NP_001268422.1:p.Ile660Thr | |
| NM_001281494.1:c.1979T>C (MSH6) | NP_001268423.1:p.Ile660Thr | |
| XM_005264271.1:c.2588T>C (MSH6) | XP_005264328.1:p.Ile863Thr | |
| XM_011532798.1:c.2702T>C (MSH6) | XP_011531100.1:p.Ile901Thr | |
| XM_011532799.1:c.2588T>C (MSH6) | XP_011531101.1:p.Ile863Thr | |
| XM_011532800.1:c.2588T>C (MSH6) | XP_011531102.1:p.Ile863Thr | |
| XM_024452819.1:c.2885T>C (MSH6) | XP_024308587.1:p.Ile962Thr | |
| XM_024452820.1:c.2702T>C (MSH6) | XP_024308588.1:p.Ile901Thr | |
| XM_024452821.1:c.2588T>C (MSH6) | XP_024308589.1:p.Ile863Thr | |
| XM_024452822.1:c.1979T>C (MSH6) | XP_024308590.1:p.Ile660Thr | |
| NM_000179.3:c.2885T>C (MSH6) MANE Select | NP_000170.1:p.Ile962Thr | |
| NM_001281492.2:c.2495T>C (MSH6) | NP_001268421.1:p.Ile832Thr | |
| NM_001281493.2:c.1979T>C (MSH6) | NP_001268422.1:p.Ile660Thr | |
| NM_001281494.2:c.1979T>C (MSH6) | NP_001268423.1:p.Ile660Thr |