Canonical Allele Identifier: CA069038

Gene: MSH6 FBXO11

Linked Data

• ClinVar Variation Id: 655766
• ClinVar RCV Id: RCV000812013 ; RCV001257480 ; RCV002453838
• dbSNP Id: rs775815297
• ExAC: 2:48027548 T / C
• gnomAD v2: 2-48027548-T-C
• gnomAD v4: 2-47800409-T-C
• MyVariant Identifiers: chr2:g.48027548T>C (hg19) ; chr2:g.47800409T>C (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000002.12:g.47800409T>C , CM000664.2:g.47800409T>C	GRCh38
NC_000002.11:g.48027548T>C , CM000664.1:g.48027548T>C	GRCh37
NC_000002.10:g.47881052T>C	NCBI36
NG_007111.1:g.22263T>C , LRG_219:g.22263T>C

Transcript Alleles

HGVS	Amino-acid Change
ENST00000411819.2:c.2129T>C (MSH6)	ENSP00000406248.2:p.Val710Ala
ENST00000420813.6:c.2129T>C (MSH6)	ENSP00000390382.2:p.Val710Ala
ENST00000455383.6:c.2129T>C (MSH6)	ENSP00000397484.2:p.Val710Ala
ENST00000700004.2:c.2426T>C (MSH6)	ENSP00000514752.2:p.Val809Ala
ENST00000699999.1:n.2510T>C (MSH6)
ENST00000700000.1:c.1606+820T>C (MSH6)	ENSP00000514749.1:n.1606+820T>C
ENST00000700002.1:c.2432T>C (MSH6)	ENSP00000514750.1:p.Val811Ala
ENST00000700003.1:c.628-3011T>C (MSH6)	ENSP00000514751.1:n.628-3011T>C
ENST00000700004.1:c.1583T>C (MSH6)	ENSP00000514752.1:p.Val528Ala
ENST00000234420.11:c.2426T>C (MSH6) MANE Select	ENSP00000234420.5:p.Val809Ala
ENST00000540021.6:c.2036T>C (MSH6)	ENSP00000446475.1:p.Val679Ala
ENST00000652107.1:c.2129T>C (MSH6)	ENSP00000498629.1:p.Val710Ala
ENST00000673637.1:c.2129T>C (MSH6)	ENSP00000501310.1:p.Val710Ala
ENST00000234420.9:c.2426T>C (MSH6)	ENSP00000234420.4:p.Val809Ala
ENST00000405808.5:c.169+7786A>G (FBXO11)	ENSP00000385127.1:n.169+7786A>G
ENST00000434234.5:c.*124+7585A>G (FBXO11)	ENSP00000402692.1:n.*124+7585A>G
ENST00000445503.5:c.*1773T>C (MSH6)	ENSP00000405294.1:n.*1773T>C
ENST00000538136.1:c.1520T>C (MSH6)	ENSP00000438580.1:p.Val507Ala
ENST00000540021.5:c.2036T>C (MSH6)	ENSP00000446475.1:p.Val679Ala
ENST00000614496.4:c.1520T>C (MSH6)	ENSP00000477844.1:p.Val507Ala
ENST00000616033.4:c.2423T>C (MSH6)	ENSP00000480261.1:p.Val808Ala
ENST00000622629.4:c.-671T>C (MSH6)	ENSP00000482078.1:n.-671T>C
NM_000179.2:c.2426T>C , LRG_219t1:c.2426T>C (MSH6)	NP_000170.1:p.Val809Ala
NM_001281492.1:c.2036T>C (MSH6)	NP_001268421.1:p.Val679Ala
NM_001281493.1:c.1520T>C (MSH6)	NP_001268422.1:p.Val507Ala
NM_001281494.1:c.1520T>C (MSH6)	NP_001268423.1:p.Val507Ala
XM_005264271.1:c.2129T>C (MSH6)	XP_005264328.1:p.Val710Ala
XM_011532798.1:c.2243T>C (MSH6)	XP_011531100.1:p.Val748Ala
XM_011532799.1:c.2129T>C (MSH6)	XP_011531101.1:p.Val710Ala
XM_011532800.1:c.2129T>C (MSH6)	XP_011531102.1:p.Val710Ala
XM_024452819.1:c.2426T>C (MSH6)	XP_024308587.1:p.Val809Ala
XM_024452820.1:c.2243T>C (MSH6)	XP_024308588.1:p.Val748Ala
XM_024452821.1:c.2129T>C (MSH6)	XP_024308589.1:p.Val710Ala
XM_024452822.1:c.1520T>C (MSH6)	XP_024308590.1:p.Val507Ala
NM_000179.3:c.2426T>C (MSH6) MANE Select	NP_000170.1:p.Val809Ala
NM_001281492.2:c.2036T>C (MSH6)	NP_001268421.1:p.Val679Ala
NM_001281493.2:c.1520T>C (MSH6)	NP_001268422.1:p.Val507Ala
NM_001281494.2:c.1520T>C (MSH6)	NP_001268423.1:p.Val507Ala