Canonical Allele Identifier: CA064872

Gene: SCN5A

Linked Data

• ClinVar Variation Id: 449098
• ClinVar RCV Id: RCV000520813 ; RCV001841408 ; RCV002358403
• dbSNP Id: rs767089602
• ExAC: 3:38592032 C / T
• gnomAD v2: 3-38592032-C-T
• gnomAD v3: 3-38550541-C-T
• gnomAD v4: 3-38550541-C-T
• COSMIC: COSM4724115 ; COSM4724116 ; COSM4724117
• MyVariant Identifiers: chr3:g.38592032C>T (hg19) ; chr3:g.38550541C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000003.12:g.38550541C>T , CM000665.2:g.38550541C>T	GRCh38
NC_000003.11:g.38592032C>T , CM000665.1:g.38592032C>T	GRCh37
NC_000003.10:g.38567036C>T	NCBI36
NG_008934.1:g.104132G>A , LRG_289:g.104132G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000327956.7:c.5828G>A	ENSP00000333674.7:p.Arg1943Gln
ENST00000333535.9:c.5831G>A	ENSP00000328968.4:p.Arg1944Gln
ENST00000413689.6:c.5831G>A MANE Plus Clinical	ENSP00000410257.1:p.Arg1944Gln
ENST00000423572.7:c.5828G>A MANE Select	ENSP00000398266.2:p.Arg1943Gln
ENST00000333535.8:c.5831G>A	ENSP00000328968.4:p.Arg1944Gln
ENST00000413689.5:c.5831G>A	ENSP00000410257.1:p.Arg1944Gln
ENST00000414099.6:c.5777G>A	ENSP00000398962.2:p.Arg1926Gln
ENST00000423572.6:c.5828G>A	ENSP00000398266.2:p.Arg1943Gln
ENST00000425664.5:c.5777G>A	ENSP00000416634.1:p.Arg1926Gln
ENST00000449557.6:c.5669G>A	ENSP00000413996.2:p.Arg1890Gln
ENST00000450102.6:c.5669G>A	ENSP00000403355.2:p.Arg1890Gln
ENST00000451551.6:c.5669G>A	ENSP00000388797.2:p.Arg1890Gln
ENST00000455624.6:c.5732G>A	ENSP00000399524.2:p.Arg1911Gln
NM_000335.4:c.5828G>A , LRG_289t2:c.5828G>A	NP_000326.2:p.Arg1943Gln
NM_001099404.1:c.5831G>A , LRG_289t3:c.5831G>A	NP_001092874.1:p.Arg1944Gln
NM_001099405.1:c.5777G>A	NP_001092875.1:p.Arg1926Gln
NM_001160160.1:c.5732G>A	NP_001153632.1:p.Arg1911Gln
NM_001160161.1:c.5669G>A	NP_001153633.1:p.Arg1890Gln
NM_198056.2:c.5831G>A , LRG_289t1:c.5831G>A	NP_932173.1:p.Arg1944Gln
XM_006713282.2:c.5831G>A	XP_006713345.1:p.Arg1944Gln
XM_011533991.1:c.5828G>A	XP_011532293.1:p.Arg1943Gln
XM_011533992.1:c.5702G>A	XP_011532294.1:p.Arg1901Gln
NM_001354701.1:c.5774G>A	NP_001341630.1:p.Arg1925Gln
XM_011533991.2:c.5828G>A	XP_011532293.1:p.Arg1943Gln
XM_017007017.1:c.5669G>A	XP_016862506.1:p.Arg1890Gln
NM_000335.5:c.5828G>A MANE Select	NP_000326.2:p.Arg1943Gln
NM_001160160.2:c.5732G>A	NP_001153632.1:p.Arg1911Gln
NM_001354701.2:c.5774G>A	NP_001341630.1:p.Arg1925Gln
NM_001099404.2:c.5831G>A MANE Plus Clinical	NP_001092874.1:p.Arg1944Gln
NM_001099405.2:c.5777G>A	NP_001092875.1:p.Arg1926Gln
NM_001160161.2:c.5669G>A	NP_001153633.1:p.Arg1890Gln
NM_198056.3:c.5831G>A	NP_932173.1:p.Arg1944Gln