Canonical Allele Identifier: CA054573

Gene: TSC2

Linked Data

• ClinVar Variation Id: 406048
• ClinVar RCV Id: RCV001023801 ; RCV000497304 ; RCV001087863 ; RCV004000709 ; RCV004533164
• dbSNP Id: rs781630603
• ExAC: 16:2138318 C / T
• gnomAD v2: 16-2138318-C-T
• gnomAD v3: 16-2088317-C-T
• gnomAD v4: 16-2088317-C-T
• COSMIC: COSM3402167 ; COSM3402168
• MyVariant Identifiers: chr16:g.2138318C>T (hg19) ; chr16:g.2088317C>T (hg38)

Genomic Alleles

HGVS	Genome Assembly
NC_000016.10:g.2088317C>T , CM000678.2:g.2088317C>T	GRCh38
NC_000016.9:g.2138318C>T , CM000678.1:g.2138318C>T	GRCh37
NC_000016.8:g.2078319C>T	NCBI36
NG_005895.1:g.44012C>T , LRG_487:g.44012C>T
NG_008617.1:g.54904G>A

Transcript Alleles

HGVS	Amino-acid Change
ENST00000568566.6:c.*3600C>T	ENSP00000455997.2:n.*3600C>T
ENST00000642206.2:c.5098C>T	ENSP00000495146.2:p.Arg1700Cys
ENST00000642365.2:c.5248C>T	ENSP00000495459.2:p.Arg1750Cys
ENST00000644417.2:c.*5764C>T	ENSP00000493912.2:n.*5764C>T
ENST00000646464.2:c.*8000C>T	ENSP00000496610.2:n.*8000C>T
ENST00000219476.9:c.5251C>T MANE Select	ENSP00000219476.3:p.Arg1751Cys
ENST00000350773.9:c.5182C>T	ENSP00000344383.4:p.Arg1728Cys
ENST00000401874.7:c.5050C>T	ENSP00000384468.2:p.Arg1684Cys
ENST00000568454.6:c.5083C>T	ENSP00000454487.1:p.Arg1695Cys
ENST00000569110.2:c.1474C>T
ENST00000569930.2:n.3133C>T
ENST00000642365.1:c.3905C>T
ENST00000642561.1:c.5110C>T	ENSP00000495099.1:p.Arg1704Cys
ENST00000642791.1:n.848C>T
ENST00000642797.1:c.5053C>T	ENSP00000493846.1:p.Arg1685Cys
ENST00000642936.1:c.5119C>T	ENSP00000494514.1:p.Arg1707Cys
ENST00000643088.1:c.5044C>T	ENSP00000494747.1:p.Arg1682Cys
ENST00000643426.1:n.2899C>T
ENST00000643946.1:c.5176C>T	ENSP00000495927.1:p.Arg1726Cys
ENST00000644043.1:c.5122C>T	ENSP00000496262.1:p.Arg1708Cys
ENST00000644329.1:c.5137C>T	ENSP00000496611.1:p.Arg1713Cys
ENST00000644335.1:c.5047C>T	ENSP00000496317.1:p.Arg1683Cys
ENST00000644399.1:c.5172C>T
ENST00000645024.1:n.3335C>T
ENST00000646388.1:c.5245C>T	ENSP00000495921.1:p.Arg1749Cys
ENST00000646634.1:n.4066C>T
ENST00000646674.1:n.2503C>T
ENST00000647042.1:n.2474C>T
ENST00000647180.1:n.2364C>T
ENST00000219476.7:c.5251C>T	ENSP00000219476.3:p.Arg1751Cys
ENST00000350773.8:c.5182C>T	ENSP00000344383.4:p.Arg1728Cys
ENST00000382538.10:c.4906C>T	ENSP00000371978.6:p.Arg1636Cys
ENST00000401874.6:c.5050C>T	ENSP00000384468.2:p.Arg1684Cys
ENST00000439117.6:c.*4418C>T	ENSP00000406980.2:n.*4418C>T
ENST00000439673.6:c.4942C>T	ENSP00000399232.2:p.Arg1648Cys
ENST00000497886.5:n.2974C>T
ENST00000568454.5:c.5083C>T	ENSP00000454487.1:p.Arg1695Cys
ENST00000569110.1:c.1433C>T
ENST00000569930.1:n.2366C>T
NM_000548.3:c.5251C>T , LRG_487t1:c.5251C>T	NP_000539.2:p.Arg1751Cys
NM_001077183.1:c.5050C>T	NP_001070651.1:p.Arg1684Cys
NM_001114382.1:c.5182C>T	NP_001107854.1:p.Arg1728Cys
XM_005255529.3:c.5122C>T	XP_005255586.2:p.Arg1708Cys
XM_005255531.3:c.5053C>T	XP_005255588.2:p.Arg1685Cys
XM_011522636.1:c.5305C>T	XP_011520938.1:p.Arg1769Cys
XM_011522637.1:c.5302C>T	XP_011520939.1:p.Arg1768Cys
XM_011522638.1:c.5194C>T	XP_011520940.1:p.Arg1732Cys
XM_011522639.1:c.5176C>T	XP_011520941.1:p.Arg1726Cys
XM_011522640.1:c.5173C>T	XP_011520942.1:p.Arg1725Cys
XM_011522641.1:c.4942C>T	XP_011520943.1:p.Arg1648Cys
NM_000548.4:c.5251C>T	NP_000539.2:p.Arg1751Cys
NM_001077183.2:c.5050C>T	NP_001070651.1:p.Arg1684Cys
NM_001114382.2:c.5182C>T	NP_001107854.1:p.Arg1728Cys
NM_001318827.1:c.4942C>T	NP_001305756.1:p.Arg1648Cys
NM_001318829.1:c.4906C>T	NP_001305758.1:p.Arg1636Cys
NM_001318831.1:c.4519C>T	NP_001305760.1:p.Arg1507Cys
NM_001318832.1:c.5083C>T	NP_001305761.1:p.Arg1695Cys
NM_001363528.1:c.5053C>T	NP_001350457.1:p.Arg1685Cys
NM_021055.2:c.5122C>T	NP_066399.2:p.Arg1708Cys
XM_005255531.4:c.5053C>T	XP_005255588.2:p.Arg1685Cys
XM_011522636.2:c.5305C>T	XP_011520938.1:p.Arg1769Cys
XM_011522637.2:c.5302C>T	XP_011520939.1:p.Arg1768Cys
XM_011522638.2:c.5467C>T	XP_011520940.2:p.Arg1823Cys
XM_011522639.2:c.5176C>T	XP_011520941.1:p.Arg1726Cys
XM_011522640.2:c.5173C>T	XP_011520942.1:p.Arg1725Cys
XM_017023615.1:c.5248C>T	XP_016879104.1:p.Arg1750Cys
XM_017023616.1:c.5119C>T	XP_016879105.1:p.Arg1707Cys
XM_017023617.1:c.5215C>T	XP_016879106.1:p.Arg1739Cys
XM_017023618.1:c.3961C>T	XP_016879107.1:p.Arg1321Cys
XM_024450413.1:c.5137C>T	XP_024306181.1:p.Arg1713Cys
NM_000548.5:c.5251C>T MANE Select	NP_000539.2:p.Arg1751Cys
NM_001370404.1:c.5119C>T	NP_001357333.1:p.Arg1707Cys
NM_001370405.1:c.5110C>T	NP_001357334.1:p.Arg1704Cys
NM_001077183.3:c.5050C>T	NP_001070651.1:p.Arg1684Cys
NM_001114382.3:c.5182C>T	NP_001107854.1:p.Arg1728Cys
NM_001318827.2:c.4942C>T	NP_001305756.1:p.Arg1648Cys
NM_001318829.2:c.4906C>T	NP_001305758.1:p.Arg1636Cys
NM_001318831.2:c.4519C>T	NP_001305760.1:p.Arg1507Cys
NM_001318832.2:c.5083C>T	NP_001305761.1:p.Arg1695Cys
NM_001363528.2:c.5053C>T	NP_001350457.1:p.Arg1685Cys
NM_021055.3:c.5122C>T	NP_066399.2:p.Arg1708Cys