Canonical Allele Identifier: CA050918
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 231801
dbSNP Id: rs749871098
gnomAD v2: 7-6038754-C-T
gnomAD v3: 7-5999123-C-T
gnomAD v4: 7-5999123-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5999123C>T , CM000669.2:g.5999123C>T GRCh38
NC_000007.13:g.6038754C>T , CM000669.1:g.6038754C>T GRCh37
NC_000007.12:g.6005280C>T NCBI36
NG_008466.1:g.14984G>A , LRG_161:g.14984G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*284G>A ENSP00000514615.2:n.*284G>A
ENST00000699840.2:c.687G>A ENSP00000514638.2:p.Val229=
ENST00000699930.2:c.597+93G>A ENSP00000514695.2:n.597+93G>A
ENST00000406569.8:c.690G>A ENSP00000514464.1:p.Val230=
ENST00000644110.2:c.*284G>A ENSP00000496392.2:n.*284G>A
ENST00000699752.1:c.690G>A ENSP00000514561.1:p.Val230=
ENST00000699753.1:c.*89G>A ENSP00000514562.1:n.*89G>A
ENST00000699754.1:c.690G>A ENSP00000514563.1:p.Val230=
ENST00000699755.1:c.*89G>A ENSP00000514564.1:n.*89G>A
ENST00000699756.1:c.*277G>A ENSP00000514565.1:n.*277G>A
ENST00000699757.1:c.139G>A ENSP00000514566.1:p.Val47Ile
ENST00000699758.1:c.403G>A ENSP00000514567.1:p.Val135Ile
ENST00000699759.1:n.762G>A
ENST00000699760.1:c.372G>A ENSP00000514568.1:p.Val124=
ENST00000699761.1:c.285G>A ENSP00000514569.1:p.Val95=
ENST00000699762.1:c.133-1700G>A ENSP00000514570.1:n.133-1700G>A
ENST00000699763.1:c.285G>A ENSP00000514571.1:p.Val95=
ENST00000699764.1:c.690G>A ENSP00000514572.1:p.Val230=
ENST00000699765.1:c.372G>A ENSP00000514573.1:p.Val124=
ENST00000699766.1:c.690G>A ENSP00000514574.1:p.Val230=
ENST00000699767.1:c.690G>A ENSP00000514575.1:p.Val230=
ENST00000699768.1:c.690G>A ENSP00000514576.1:p.Val230=
ENST00000699811.1:c.285G>A ENSP00000514614.1:p.Val95=
ENST00000699813.1:n.803G>A
ENST00000699814.1:c.511G>A
ENST00000699815.1:c.*191G>A ENSP00000514616.1:n.*191G>A
ENST00000699816.1:c.285G>A ENSP00000514617.1:p.Val95=
ENST00000699817.1:c.*284G>A ENSP00000514618.1:n.*284G>A
ENST00000699818.1:c.285G>A ENSP00000514619.1:p.Val95=
ENST00000699819.1:c.223G>A ENSP00000514620.1:p.Val75Ile
ENST00000699820.1:c.690G>A ENSP00000514621.1:p.Val230=
ENST00000699821.1:c.285G>A ENSP00000514622.1:p.Val95=
ENST00000699822.1:c.*142G>A ENSP00000514623.1:n.*142G>A
ENST00000699823.1:c.285G>A ENSP00000514624.1:p.Val95=
ENST00000699824.1:c.*193G>A ENSP00000514625.1:n.*193G>A
ENST00000699825.1:c.285G>A ENSP00000514626.1:p.Val95=
ENST00000699826.1:c.*89G>A ENSP00000514627.1:n.*89G>A
ENST00000699827.1:c.538-1700G>A ENSP00000514628.1:n.538-1700G>A
ENST00000699828.1:c.690G>A ENSP00000514629.1:p.Val230=
ENST00000699829.1:c.*191G>A ENSP00000514630.1:n.*191G>A
ENST00000699830.1:c.*89G>A ENSP00000514631.1:n.*89G>A
ENST00000699831.1:n.602G>A
ENST00000699832.1:n.973G>A
ENST00000699833.1:n.770G>A
ENST00000699834.1:n.807+89G>A
ENST00000699837.1:c.285G>A ENSP00000514635.1:p.Val95=
ENST00000699838.1:c.*590G>A ENSP00000514636.1:n.*590G>A
ENST00000699839.1:c.876G>A ENSP00000514637.1:p.Val292=
ENST00000699840.1:c.687G>A ENSP00000514638.1:p.Val229=
ENST00000699916.1:c.238G>A ENSP00000514684.1:p.Val80Ile
ENST00000699917.1:c.*139G>A ENSP00000514685.1:n.*139G>A
ENST00000699918.1:c.*191G>A ENSP00000514686.1:n.*191G>A
ENST00000699919.1:c.*277G>A ENSP00000514687.1:n.*277G>A
ENST00000699920.1:c.*326G>A ENSP00000514688.1:n.*326G>A
ENST00000699928.1:c.690G>A ENSP00000514693.1:p.Val230=
ENST00000699929.1:c.*89G>A ENSP00000514694.1:n.*89G>A
ENST00000699930.1:c.597+93G>A ENSP00000514695.1:n.597+93G>A
ENST00000699931.1:n.801G>A
ENST00000699932.1:c.690G>A ENSP00000514696.1:p.Val230=
ENST00000699933.1:n.770G>A
ENST00000699951.1:c.690G>A ENSP00000514706.1:p.Val230=
ENST00000699952.1:c.690G>A ENSP00000514707.1:p.Val230=
ENST00000699953.1:c.690G>A ENSP00000514708.1:p.Val230=
ENST00000699954.1:c.*89G>A ENSP00000514709.1:n.*89G>A
ENST00000265849.12:c.690G>A MANE Select ENSP00000265849.7:p.Val230=
ENST00000642292.1:c.285G>A ENSP00000495524.1:p.Val95=
ENST00000642456.1:c.285G>A ENSP00000493814.1:p.Val95=
ENST00000643595.1:c.*89G>A ENSP00000494497.1:n.*89G>A
ENST00000644110.1:c.372G>A ENSP00000496392.1:p.Val124=
ENST00000265849.11:c.690G>A ENSP00000265849.7:p.Val230=
ENST00000382321.5:c.690G>A ENSP00000371758.4:p.Val230=
ENST00000406569.7:n.690G>A
ENST00000441476.6:c.372G>A ENSP00000392843.2:p.Val124=
ENST00000469652.1:n.62+6870G>A
NM_000535.5:c.690G>A , LRG_161t1:c.690G>A NP_000526.1:p.Val230=
NR_003085.2:n.772G>A
XM_006715742.2:c.684G>A XP_006715805.1:p.Val228=
XM_011515427.1:c.735G>A XP_011513729.1:p.Val245=
XM_011515428.1:c.735G>A XP_011513730.1:p.Val245=
XM_011515429.1:c.372G>A XP_011513731.1:p.Val124=
XM_011515430.1:c.372G>A XP_011513732.1:p.Val124=
NM_000535.6:c.690G>A NP_000526.2:p.Val230=
NM_001322003.1:c.285G>A NP_001308932.1:p.Val95=
NM_001322004.1:c.285G>A NP_001308933.1:p.Val95=
NM_001322005.1:c.285G>A NP_001308934.1:p.Val95=
NM_001322006.1:c.690G>A NP_001308935.1:p.Val230=
NM_001322007.1:c.372G>A NP_001308936.1:p.Val124=
NM_001322008.1:c.372G>A NP_001308937.1:p.Val124=
NM_001322009.1:c.285G>A NP_001308938.1:p.Val95=
NM_001322010.1:c.285G>A NP_001308939.1:p.Val95=
NM_001322011.1:c.-244G>A NP_001308940.1:n.-244G>A
NM_001322012.1:c.-244G>A NP_001308941.1:n.-244G>A
NM_001322013.1:c.133-1700G>A NP_001308942.1:n.133-1700G>A
NM_001322014.1:c.690G>A NP_001308943.1:p.Val230=
NM_001322015.1:c.381G>A NP_001308944.1:p.Val127=
NR_136154.1:n.777G>A
XM_017012342.2:c.-144G>A XP_016867831.1:n.-144G>A
XM_024446800.1:c.285G>A XP_024302568.1:p.Val95=
NM_000535.7:c.690G>A MANE Select NP_000526.2:p.Val230=
NM_001322003.2:c.285G>A NP_001308932.1:p.Val95=
NM_001322004.2:c.285G>A NP_001308933.1:p.Val95=
NM_001322005.2:c.285G>A NP_001308934.1:p.Val95=
NM_001322006.2:c.690G>A NP_001308935.1:p.Val230=
NM_001322008.2:c.372G>A NP_001308937.1:p.Val124=
NM_001322009.2:c.285G>A NP_001308938.1:p.Val95=
NM_001322010.2:c.285G>A NP_001308939.1:p.Val95=
NM_001322011.2:c.-244G>A NP_001308940.1:n.-244G>A
NM_001322012.2:c.-244G>A NP_001308941.1:n.-244G>A
NM_001322013.2:c.133-1700G>A NP_001308942.1:n.133-1700G>A
NM_001322014.2:c.690G>A NP_001308943.1:p.Val230=
NM_001322015.2:c.381G>A NP_001308944.1:p.Val127=
NM_001322007.2:c.372G>A NP_001308936.1:p.Val124=