Canonical Allele Identifier: CA045499
Gene: PMS2 HGNC NCBI

Linked Data

ClinVar Variation Id: 480298
dbSNP Id: rs762100304
gnomAD v2: 7-6026636-C-T
gnomAD v3: 7-5987005-C-T
gnomAD v4: 7-5987005-C-T

Genomic Alleles

HGVS Genome Assembly
NC_000007.14:g.5987005C>T , CM000669.2:g.5987005C>T GRCh38
NC_000007.13:g.6026636C>T , CM000669.1:g.6026636C>T GRCh37
NC_000007.12:g.5993162C>T NCBI36
NG_008466.1:g.27102G>A , LRG_161:g.27102G>A

Transcript Alleles

HGVS Amino-acid Change
ENST00000699814.2:c.*1156G>A ENSP00000514615.2:n.*1156G>A
ENST00000699840.2:c.1757G>A ENSP00000514638.2:p.Ser586Asn
ENST00000699930.2:c.1652G>A ENSP00000514695.2:p.Ser551Asn
ENST00000406569.8:c.1678+82G>A ENSP00000514464.1:n.1678+82G>A
ENST00000644110.2:c.*1354G>A ENSP00000496392.2:n.*1354G>A
ENST00000699752.1:c.1604G>A ENSP00000514561.1:p.Ser535Asn
ENST00000699753.1:c.*1181G>A ENSP00000514562.1:n.*1181G>A
ENST00000699754.1:c.1562G>A ENSP00000514563.1:p.Ser521Asn
ENST00000699755.1:c.*1159G>A ENSP00000514564.1:n.*1159G>A
ENST00000699756.1:c.*1347G>A ENSP00000514565.1:n.*1347G>A
ENST00000699757.1:c.*1017G>A ENSP00000514566.1:n.*1017G>A
ENST00000699758.1:c.*1017G>A ENSP00000514567.1:n.*1017G>A
ENST00000699759.1:n.2614G>A
ENST00000699760.1:c.1442G>A ENSP00000514568.1:p.Ser481Asn
ENST00000699761.1:c.1355G>A ENSP00000514569.1:p.Ser452Asn
ENST00000699762.1:c.1187G>A ENSP00000514570.1:p.Ser396Asn
ENST00000699763.1:c.*850G>A ENSP00000514571.1:n.*850G>A
ENST00000699764.1:c.*78G>A ENSP00000514572.1:n.*78G>A
ENST00000699765.1:c.*856G>A ENSP00000514573.1:n.*856G>A
ENST00000699766.1:c.1760G>A ENSP00000514574.1:p.Ser587Asn
ENST00000699767.1:c.1760G>A ENSP00000514575.1:p.Ser587Asn
ENST00000699768.1:c.1760G>A ENSP00000514576.1:p.Ser587Asn
ENST00000699811.1:c.1355G>A ENSP00000514614.1:p.Ser452Asn
ENST00000699813.1:n.1873G>A
ENST00000699814.1:c.1383G>A
ENST00000699815.1:c.*1291G>A ENSP00000514616.1:n.*1291G>A
ENST00000699816.1:c.*650G>A ENSP00000514617.1:n.*650G>A
ENST00000699817.1:c.*1354G>A ENSP00000514618.1:n.*1354G>A
ENST00000699818.1:c.1355G>A ENSP00000514619.1:p.Ser452Asn
ENST00000699819.1:c.*917G>A ENSP00000514620.1:n.*917G>A
ENST00000699820.1:c.1144+2795G>A ENSP00000514621.1:n.1144+2795G>A
ENST00000699821.1:c.1355G>A ENSP00000514622.1:p.Ser452Asn
ENST00000699822.1:c.*1212G>A ENSP00000514623.1:n.*1212G>A
ENST00000699823.1:c.1355G>A ENSP00000514624.1:p.Ser452Asn
ENST00000699824.1:c.*1263G>A ENSP00000514625.1:n.*1263G>A
ENST00000699825.1:c.1199G>A ENSP00000514626.1:p.Ser400Asn
ENST00000699826.1:c.*1159G>A ENSP00000514627.1:n.*1159G>A
ENST00000699827.1:c.1592G>A ENSP00000514628.1:p.Ser531Asn
ENST00000699828.1:c.*850G>A ENSP00000514629.1:n.*850G>A
ENST00000699833.1:n.3532G>A
ENST00000699837.1:c.1355G>A ENSP00000514635.1:p.Ser452Asn
ENST00000699838.1:c.*1660G>A ENSP00000514636.1:n.*1660G>A
ENST00000699839.1:c.1946G>A ENSP00000514637.1:p.Ser649Asn
ENST00000699916.1:c.*1017G>A ENSP00000514684.1:n.*1017G>A
ENST00000699917.1:c.*1209G>A ENSP00000514685.1:n.*1209G>A
ENST00000699918.1:c.*1261G>A ENSP00000514686.1:n.*1261G>A
ENST00000699919.1:c.*1347G>A ENSP00000514687.1:n.*1347G>A
ENST00000699920.1:c.*1396G>A ENSP00000514688.1:n.*1396G>A
ENST00000699928.1:c.989-4014G>A ENSP00000514693.1:n.989-4014G>A
ENST00000699929.1:c.*1061G>A ENSP00000514694.1:n.*1061G>A
ENST00000699930.1:c.1652G>A ENSP00000514695.1:p.Ser551Asn
ENST00000699931.1:n.3188G>A
ENST00000699951.1:c.*856G>A ENSP00000514706.1:n.*856G>A
ENST00000699952.1:c.803+10321G>A ENSP00000514707.1:n.803+10321G>A
ENST00000699953.1:c.*867G>A ENSP00000514708.1:n.*867G>A
ENST00000699954.1:c.*1061G>A ENSP00000514709.1:n.*1061G>A
ENST00000265849.12:c.1760G>A MANE Select ENSP00000265849.7:p.Ser587Asn
ENST00000642292.1:c.1355G>A ENSP00000495524.1:p.Ser452Asn
ENST00000642456.1:c.1355G>A ENSP00000493814.1:p.Ser452Asn
ENST00000643595.1:c.*1159G>A ENSP00000494497.1:n.*1159G>A
ENST00000644110.1:c.1442G>A ENSP00000496392.1:p.Ser481Asn
ENST00000265849.11:c.1760G>A ENSP00000265849.7:p.Ser587Asn
ENST00000382321.5:c.804-4014G>A ENSP00000371758.4:n.804-4014G>A
ENST00000406569.7:n.1678+82G>A
ENST00000441476.6:c.1442G>A ENSP00000392843.2:p.Ser481Asn
ENST00000469652.1:n.63-4100G>A
NM_000535.5:c.1760G>A , LRG_161t1:c.1760G>A NP_000526.1:p.Ser587Asn
NR_003085.2:n.1842G>A
XM_006715742.2:c.1754G>A XP_006715805.1:p.Ser585Asn
XM_006715744.2:c.827G>A XP_006715807.1:p.Ser276Asn
XM_011515427.1:c.1805G>A XP_011513729.1:p.Ser602Asn
XM_011515428.1:c.1649G>A XP_011513730.1:p.Ser550Asn
XM_011515429.1:c.1442G>A XP_011513731.1:p.Ser481Asn
XM_011515430.1:c.1442G>A XP_011513732.1:p.Ser481Asn
NM_000535.6:c.1760G>A NP_000526.2:p.Ser587Asn
NM_001322003.1:c.1355G>A NP_001308932.1:p.Ser452Asn
NM_001322004.1:c.1355G>A NP_001308933.1:p.Ser452Asn
NM_001322005.1:c.1355G>A NP_001308934.1:p.Ser452Asn
NM_001322006.1:c.1604G>A NP_001308935.1:p.Ser535Asn
NM_001322007.1:c.1442G>A NP_001308936.1:p.Ser481Asn
NM_001322008.1:c.1442G>A NP_001308937.1:p.Ser481Asn
NM_001322009.1:c.1355G>A NP_001308938.1:p.Ser452Asn
NM_001322010.1:c.1199G>A NP_001308939.1:p.Ser400Asn
NM_001322011.1:c.827G>A NP_001308940.1:p.Ser276Asn
NM_001322012.1:c.827G>A NP_001308941.1:p.Ser276Asn
NM_001322013.1:c.1187G>A NP_001308942.1:p.Ser396Asn
NM_001322014.1:c.1760G>A NP_001308943.1:p.Ser587Asn
NM_001322015.1:c.1451G>A NP_001308944.1:p.Ser484Asn
NR_136154.1:n.1847G>A
XM_006715744.4:c.827G>A XP_006715807.1:p.Ser276Asn
XM_017012342.2:c.827G>A XP_016867831.1:p.Ser276Asn
XM_024446800.1:c.1199G>A XP_024302568.1:p.Ser400Asn
NM_000535.7:c.1760G>A MANE Select NP_000526.2:p.Ser587Asn
NM_001322003.2:c.1355G>A NP_001308932.1:p.Ser452Asn
NM_001322004.2:c.1355G>A NP_001308933.1:p.Ser452Asn
NM_001322005.2:c.1355G>A NP_001308934.1:p.Ser452Asn
NM_001322006.2:c.1604G>A NP_001308935.1:p.Ser535Asn
NM_001322008.2:c.1442G>A NP_001308937.1:p.Ser481Asn
NM_001322009.2:c.1355G>A NP_001308938.1:p.Ser452Asn
NM_001322010.2:c.1199G>A NP_001308939.1:p.Ser400Asn
NM_001322011.2:c.827G>A NP_001308940.1:p.Ser276Asn
NM_001322012.2:c.827G>A NP_001308941.1:p.Ser276Asn
NM_001322013.2:c.1187G>A NP_001308942.1:p.Ser396Asn
NM_001322014.2:c.1760G>A NP_001308943.1:p.Ser587Asn
NM_001322015.2:c.1451G>A NP_001308944.1:p.Ser484Asn
NM_001322007.2:c.1442G>A NP_001308936.1:p.Ser481Asn